Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SRP9P49458 EGFEM1P-202ENST00000431685 1563 ntBASIC14.68□□□□□ -0.06
SRP9P49458 ME2P1-201ENST00000426028 1970 ntBASIC14.67□□□□□ -0.06
SRP9P49458 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
SRP9P49458 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.67□□□□□ -0.06
SRP9P49458 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.67□□□□□ -0.06
SRP9P49458 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.67□□□□□ -0.06
SRP9P49458 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.67□□□□□ -0.06
SRP9P49458 AC107918.4-202ENST00000641623 219 ntBASIC14.67□□□□□ -0.06
SRP9P49458 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
SRP9P49458 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.67□□□□□ -0.06
SRP9P49458 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SRP9P49458 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 NORAD-201ENST00000565493 5339 ntBASIC14.66□□□□□ -0.06
SRP9P49458 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 AC006538.1-201ENST00000567905 1585 ntBASIC14.66□□□□□ -0.06
SRP9P49458 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 RPS2P1-201ENST00000434010 821 ntBASIC14.66□□□□□ -0.06
SRP9P49458 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.66□□□□□ -0.06
SRP9P49458 AC018712.1-201ENST00000455767 687 ntBASIC14.66□□□□□ -0.06
SRP9P49458 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.66□□□□□ -0.06
SRP9P49458 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.66□□□□□ -0.06
SRP9P49458 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.66□□□□□ -0.06
SRP9P49458 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.66□□□□□ -0.06
SRP9P49458 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.66□□□□□ -0.06
SRP9P49458 AL121894.2-201ENST00000602977 491 ntBASIC14.66□□□□□ -0.06
SRP9P49458 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.66□□□□□ -0.06
SRP9P49458 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.66□□□□□ -0.06
SRP9P49458 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SRP9P49458 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SRP9P49458 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SRP9P49458 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SRP9P49458 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP9P49458 TNRC18P2-201ENST00000417666 2714 ntBASIC14.65□□□□□ -0.06
SRP9P49458 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP9P49458 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP9P49458 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SRP9P49458 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SRP9P49458 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SRP9P49458 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP9P49458 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SRP9P49458 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SRP9P49458 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.65□□□□□ -0.06
SRP9P49458 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.65□□□□□ -0.06
SRP9P49458 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.65□□□□□ -0.06
SRP9P49458 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms