Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.3■□□□□ 0.68
NEDD4P46934 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.3■□□□□ 0.68
NEDD4P46934 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.3■□□□□ 0.68
NEDD4P46934 RARRES2P9-201ENST00000565168 469 ntBASIC19.3■□□□□ 0.68
NEDD4P46934 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.3■□□□□ 0.68
NEDD4P46934 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.3■□□□□ 0.68
NEDD4P46934 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.3■□□□□ 0.68
NEDD4P46934 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.3■□□□□ 0.68
NEDD4P46934 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.3■□□□□ 0.68
NEDD4P46934 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NEDD4P46934 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NEDD4P46934 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
NEDD4P46934 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NEDD4P46934 OR6D1P-202ENST00000641007 5290 ntBASIC19.3■□□□□ 0.68
NEDD4P46934 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NEDD4P46934 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC19.29■□□□□ 0.68
NEDD4P46934 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.29■□□□□ 0.68
NEDD4P46934 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
NEDD4P46934 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NEDD4P46934 FAM220BP-201ENST00000377689 816 ntBASIC19.29■□□□□ 0.68
NEDD4P46934 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.29■□□□□ 0.68
NEDD4P46934 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.29■□□□□ 0.68
NEDD4P46934 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.29■□□□□ 0.68
NEDD4P46934 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.29■□□□□ 0.68
NEDD4P46934 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC19.29■□□□□ 0.68
NEDD4P46934 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.29■□□□□ 0.68
NEDD4P46934 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NEDD4P46934 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.29■□□□□ 0.68
NEDD4P46934 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NEDD4P46934 AC006449.6-201ENST00000612330 2296 ntBASIC19.29■□□□□ 0.68
NEDD4P46934 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NEDD4P46934 AC026691.1-201ENST00000602502 2017 ntBASIC19.28■□□□□ 0.68
NEDD4P46934 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NEDD4P46934 HLA-H-201ENST00000383620 1096 ntBASIC19.28■□□□□ 0.68
NEDD4P46934 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.28■□□□□ 0.68
NEDD4P46934 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.28■□□□□ 0.68
NEDD4P46934 RNA5SP410-201ENST00000516285 106 ntBASIC19.28■□□□□ 0.68
NEDD4P46934 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.28■□□□□ 0.68
NEDD4P46934 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 AC061975.2-201ENST00000581722 295 ntBASIC19.28■□□□□ 0.68
NEDD4P46934 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 AP001059.3-201ENST00000619053 235 ntBASIC19.28■□□□□ 0.68
NEDD4P46934 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
NEDD4P46934 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NEDD4P46934 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
NEDD4P46934 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NEDD4P46934 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NEDD4P46934 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
NEDD4P46934 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.28■□□□□ 0.68
NEDD4P46934 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.28■□□□□ 0.68
NEDD4P46934 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NEDD4P46934 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
NEDD4P46934 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NEDD4P46934 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
NEDD4P46934 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.27■□□□□ 0.68
NEDD4P46934 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NEDD4P46934 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
NEDD4P46934 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.27■□□□□ 0.68
NEDD4P46934 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.27■□□□□ 0.68
NEDD4P46934 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.27■□□□□ 0.68
NEDD4P46934 Z92544.3-201ENST00000624747 417 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms