Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A2P43004 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SLC1A2P43004 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A2P43004 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.4■□□□□ 0.22
SLC1A2P43004 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.4■□□□□ 0.22
SLC1A2P43004 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SLC1A2P43004 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC1A2P43004 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
SLC1A2P43004 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC1A2P43004 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A2P43004 AL162727.3-201ENST00000635661 2787 ntBASIC16.39■□□□□ 0.21
SLC1A2P43004 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A2P43004 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.39■□□□□ 0.21
SLC1A2P43004 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.39■□□□□ 0.21
SLC1A2P43004 AC007064.4-201ENST00000637740 555 ntBASIC16.39■□□□□ 0.21
SLC1A2P43004 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SLC1A2P43004 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SLC1A2P43004 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SLC1A2P43004 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SLC1A2P43004 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A2P43004 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC1A2P43004 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A2P43004 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC1A2P43004 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A2P43004 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC1A2P43004 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.38■□□□□ 0.21
SLC1A2P43004 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC1A2P43004 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.38■□□□□ 0.21
SLC1A2P43004 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A2P43004 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SLC1A2P43004 AC004877.2-201ENST00000623941 599 ntBASIC16.38■□□□□ 0.21
SLC1A2P43004 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A2P43004 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 BCAR1-209ENST00000546196 1340 ntBASIC16.38■□□□□ 0.21
SLC1A2P43004 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A2P43004 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A2P43004 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A2P43004 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
SLC1A2P43004 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A2P43004 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.38■□□□□ 0.21
SLC1A2P43004 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SLC1A2P43004 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A2P43004 AC092919.2-201ENST00000623631 1645 ntBASIC16.37■□□□□ 0.21
SLC1A2P43004 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A2P43004 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A2P43004 AC025580.3-201ENST00000617932 1424 ntBASIC16.37■□□□□ 0.21
SLC1A2P43004 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A2P43004 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SLC1A2P43004 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A2P43004 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
SLC1A2P43004 CDC14C-201ENST00000428251 1719 ntBASIC16.37■□□□□ 0.21
SLC1A2P43004 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SLC1A2P43004 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms