Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.15■□□□□ 0.34
MTHFRP42898 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.15■□□□□ 0.34
MTHFRP42898 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.15■□□□□ 0.34
MTHFRP42898 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.15■□□□□ 0.34
MTHFRP42898 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.15■□□□□ 0.34
MTHFRP42898 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.15■□□□□ 0.34
MTHFRP42898 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
MTHFRP42898 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.14■□□□□ 0.33
MTHFRP42898 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 AC116353.5-201ENST00000638148 1699 ntBASIC17.14■□□□□ 0.33
MTHFRP42898 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 AC124067.4-201ENST00000519691 2379 ntBASIC17.14■□□□□ 0.33
MTHFRP42898 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
MTHFRP42898 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.14■□□□□ 0.33
MTHFRP42898 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.14■□□□□ 0.33
MTHFRP42898 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 AC022210.1-201ENST00000449856 793 ntBASIC17.14■□□□□ 0.33
MTHFRP42898 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.14■□□□□ 0.33
MTHFRP42898 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.14■□□□□ 0.33
MTHFRP42898 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MTHFRP42898 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.14■□□□□ 0.33
MTHFRP42898 AC026979.3-201ENST00000607315 403 ntBASIC17.14■□□□□ 0.33
MTHFRP42898 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.14■□□□□ 0.33
MTHFRP42898 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
MTHFRP42898 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MTHFRP42898 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.14■□□□□ 0.33
MTHFRP42898 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
MTHFRP42898 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.14■□□□□ 0.33
MTHFRP42898 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MTHFRP42898 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.14■□□□□ 0.33
MTHFRP42898 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MTHFRP42898 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MTHFRP42898 AD000864.1-201ENST00000624076 2295 ntBASIC17.13■□□□□ 0.33
MTHFRP42898 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.13■□□□□ 0.33
MTHFRP42898 RN7SL837P-201ENST00000463010 287 ntBASIC17.13■□□□□ 0.33
MTHFRP42898 SDHAP3-202ENST00000515467 728 ntBASIC17.13■□□□□ 0.33
MTHFRP42898 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.13■□□□□ 0.33
MTHFRP42898 TPRX2P-201ENST00000535362 881 ntBASIC17.13■□□□□ 0.33
MTHFRP42898 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.13■□□□□ 0.33
MTHFRP42898 SRD5A3P1-201ENST00000603021 949 ntBASIC17.13■□□□□ 0.33
MTHFRP42898 AC004790.1-201ENST00000612686 536 ntBASIC17.13■□□□□ 0.33
MTHFRP42898 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.13■□□□□ 0.33
MTHFRP42898 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.13■□□□□ 0.33
MTHFRP42898 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MTHFRP42898 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.13■□□□□ 0.33
MTHFRP42898 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MTHFRP42898 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MTHFRP42898 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.12■□□□□ 0.33
MTHFRP42898 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
MTHFRP42898 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MTHFRP42898 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MTHFRP42898 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms