Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GDNFP39905 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
GDNFP39905 AC103564.2-201ENST00000432853 1299 ntBASIC14.39□□□□□ -0.11
GDNFP39905 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.39□□□□□ -0.11
GDNFP39905 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
GDNFP39905 FOSL1P1-201ENST00000511041 816 ntBASIC14.39□□□□□ -0.11
GDNFP39905 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.39□□□□□ -0.11
GDNFP39905 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
GDNFP39905 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
GDNFP39905 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.39□□□□□ -0.11
GDNFP39905 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.39□□□□□ -0.11
GDNFP39905 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.39□□□□□ -0.11
GDNFP39905 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
GDNFP39905 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.39□□□□□ -0.11
GDNFP39905 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.39□□□□□ -0.11
GDNFP39905 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
GDNFP39905 AC009336.1-201ENST00000608941 1553 ntBASIC14.39□□□□□ -0.11
GDNFP39905 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 AL353593.2-201ENST00000602529 1483 ntBASIC14.38□□□□□ -0.11
GDNFP39905 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
GDNFP39905 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
GDNFP39905 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.38□□□□□ -0.11
GDNFP39905 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 DUX4L17-201ENST00000557360 1267 ntBASIC14.38□□□□□ -0.11
GDNFP39905 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.38□□□□□ -0.11
GDNFP39905 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.38□□□□□ -0.11
GDNFP39905 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 AD001527.2-201ENST00000622994 785 ntBASIC14.38□□□□□ -0.11
GDNFP39905 AC012313.10-201ENST00000623509 926 ntBASIC14.38□□□□□ -0.11
GDNFP39905 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.38□□□□□ -0.11
GDNFP39905 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 AC132938.5-201ENST00000624980 1813 ntBASIC14.38□□□□□ -0.11
GDNFP39905 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
GDNFP39905 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.38□□□□□ -0.11
GDNFP39905 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
GDNFP39905 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GDNFP39905 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GDNFP39905 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.37□□□□□ -0.11
GDNFP39905 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 AL021920.2-201ENST00000624828 1351 ntBASIC14.37□□□□□ -0.11
GDNFP39905 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 AC023157.3-201ENST00000619086 2088 ntBASIC14.37□□□□□ -0.11
GDNFP39905 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.37□□□□□ -0.11
GDNFP39905 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GDNFP39905 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
GDNFP39905 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms