Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 MIR4785-201ENST00000585005 73 ntBASIC12.16□□□□□ -0.46
CKS2P33552 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 AC013467.2-201ENST00000605472 835 ntBASIC12.16□□□□□ -0.46
CKS2P33552 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 CDC14C-201ENST00000428251 1719 ntBASIC12.16□□□□□ -0.46
CKS2P33552 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.16□□□□□ -0.46
CKS2P33552 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.16□□□□□ -0.46
CKS2P33552 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.16□□□□□ -0.46
CKS2P33552 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 AL353593.2-201ENST00000602529 1483 ntBASIC12.15□□□□□ -0.46
CKS2P33552 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 KRT8P49-201ENST00000604166 1432 ntBASIC12.15□□□□□ -0.46
CKS2P33552 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 KLF4P1-201ENST00000412782 1185 ntBASIC12.15□□□□□ -0.46
CKS2P33552 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.15□□□□□ -0.46
CKS2P33552 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 NAPSB-206ENST00000562112 1266 ntBASIC12.15□□□□□ -0.46
CKS2P33552 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC12.15□□□□□ -0.46
CKS2P33552 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.15□□□□□ -0.46
CKS2P33552 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CKS2P33552 AC140113.3-201ENST00000605663 199 ntBASIC12.15□□□□□ -0.46
CKS2P33552 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC12.15□□□□□ -0.46
CKS2P33552 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CKS2P33552 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC12.15□□□□□ -0.46
CKS2P33552 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CKS2P33552 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CKS2P33552 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CKS2P33552 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CKS2P33552 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
CKS2P33552 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.15□□□□□ -0.47
CKS2P33552 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
CKS2P33552 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CKS2P33552 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms