Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXC13P31276 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 AC100757.3-201ENST00000622361 1406 ntBASIC16.95■□□□□ 0.3
HOXC13P31276 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXC13P31276 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC13P31276 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC13P31276 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.94■□□□□ 0.3
HOXC13P31276 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC13P31276 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.94■□□□□ 0.3
HOXC13P31276 PRYP6-201ENST00000514804 343 ntBASIC16.94■□□□□ 0.3
HOXC13P31276 AC027369.6-201ENST00000525520 931 ntBASIC16.94■□□□□ 0.3
HOXC13P31276 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC13P31276 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.94■□□□□ 0.3
HOXC13P31276 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC13P31276 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.94■□□□□ 0.3
HOXC13P31276 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HOXC13P31276 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXC13P31276 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXC13P31276 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HOXC13P31276 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXC13P31276 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXC13P31276 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC13P31276 FOXO1B-201ENST00000504678 1527 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 OR8S1-201ENST00000310194 1080 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC13P31276 COX5BP8-201ENST00000416911 349 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 NME2P1-201ENST00000426182 414 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 AC241585.1-201ENST00000433527 519 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.93■□□□□ 0.3
HOXC13P31276 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 RN7SL692P-201ENST00000464677 288 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXC13P31276 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXC13P31276 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.93■□□□□ 0.3
HOXC13P31276 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.93■□□□□ 0.3
HOXC13P31276 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HOXC13P31276 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC13P31276 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXC13P31276 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXC13P31276 SPDYE12P-201ENST00000618416 771 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXC13P31276 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
HOXC13P31276 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXC13P31276 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 MTHFR-217ENST00000641820 1569 ntBASIC16.93■□□□□ 0.3
HOXC13P31276 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXC13P31276 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HOXC13P31276 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HOXC13P31276 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HOXC13P31276 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC13P31276 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXC13P31276 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC13P31276 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
HOXC13P31276 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXC13P31276 AC142381.1-201ENST00000426099 345 ntBASIC16.92■□□□□ 0.3
HOXC13P31276 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 AC105233.2-201ENST00000523697 349 ntBASIC16.92■□□□□ 0.3
HOXC13P31276 AF228730.5-201ENST00000530288 346 ntBASIC16.92■□□□□ 0.3
HOXC13P31276 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXC13P31276 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXC13P31276 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms