Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
HOXC12P31275 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.62□□□□□ -0.07
HOXC12P31275 SPDYE11-202ENST00000450699 704 ntBASIC14.62□□□□□ -0.07
HOXC12P31275 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.62□□□□□ -0.07
HOXC12P31275 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.62□□□□□ -0.07
HOXC12P31275 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.62□□□□□ -0.07
HOXC12P31275 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.62□□□□□ -0.07
HOXC12P31275 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.62□□□□□ -0.07
HOXC12P31275 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.62□□□□□ -0.07
HOXC12P31275 SPDYE9P-201ENST00000570642 692 ntBASIC14.62□□□□□ -0.07
HOXC12P31275 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 SPDYE10P-202ENST00000612005 668 ntBASIC14.62□□□□□ -0.07
HOXC12P31275 SPDYE8P-202ENST00000612377 668 ntBASIC14.62□□□□□ -0.07
HOXC12P31275 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.62□□□□□ -0.07
HOXC12P31275 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
HOXC12P31275 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
HOXC12P31275 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
HOXC12P31275 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
HOXC12P31275 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
HOXC12P31275 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.61□□□□□ -0.07
HOXC12P31275 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 AL355306.1-201ENST00000415580 579 ntBASIC14.61□□□□□ -0.07
HOXC12P31275 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 TIMM8BP1-201ENST00000452384 211 ntBASIC14.61□□□□□ -0.07
HOXC12P31275 INGX-202ENST00000489074 768 ntBASIC14.61□□□□□ -0.07
HOXC12P31275 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.61□□□□□ -0.07
HOXC12P31275 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.61□□□□□ -0.07
HOXC12P31275 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.61□□□□□ -0.07
HOXC12P31275 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.61□□□□□ -0.07
HOXC12P31275 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.61□□□□□ -0.07
HOXC12P31275 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 MIR4492-201ENST00000581627 80 ntBASIC14.61□□□□□ -0.07
HOXC12P31275 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.61□□□□□ -0.07
HOXC12P31275 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
HOXC12P31275 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
HOXC12P31275 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
HOXC12P31275 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
HOXC12P31275 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC14.6□□□□□ -0.07
HOXC12P31275 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
HOXC12P31275 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.6□□□□□ -0.07
HOXC12P31275 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
HOXC12P31275 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms