Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.12■□□□□ 0.01
SHC1P29353 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.12■□□□□ 0.01
SHC1P29353 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 AL513477.1-201ENST00000602865 2407 ntBASIC15.12■□□□□ 0.01
SHC1P29353 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 AC024909.3-201ENST00000611513 2257 ntBASIC15.12■□□□□ 0.01
SHC1P29353 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SHC1P29353 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 AC087641.1-201ENST00000557561 1021 ntBASIC15.12■□□□□ 0.01
SHC1P29353 PDPK2P-202ENST00000562415 1191 ntBASIC15.12■□□□□ 0.01
SHC1P29353 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.12■□□□□ 0.01
SHC1P29353 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SHC1P29353 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.12■□□□□ 0.01
SHC1P29353 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.12■□□□□ 0.01
SHC1P29353 AC007064.4-201ENST00000637740 555 ntBASIC15.12■□□□□ 0.01
SHC1P29353 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.12■□□□□ 0.01
SHC1P29353 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.12■□□□□ 0.01
SHC1P29353 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 HLA-A-202ENST00000376806 1854 ntBASIC15.12■□□□□ 0.01
SHC1P29353 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SHC1P29353 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SHC1P29353 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.11■□□□□ 0.01
SHC1P29353 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.11■□□□□ 0.01
SHC1P29353 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.11■□□□□ 0.01
SHC1P29353 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.11■□□□□ 0.01
SHC1P29353 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.11■□□□□ 0.01
SHC1P29353 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.11■□□□□ 0.01
SHC1P29353 AC040169.1-201ENST00000565382 521 ntBASIC15.11■□□□□ 0.01
SHC1P29353 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.11■□□□□ 0.01
SHC1P29353 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
SHC1P29353 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.11■□□□□ 0.01
SHC1P29353 AC013467.2-201ENST00000605472 835 ntBASIC15.11■□□□□ 0.01
SHC1P29353 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.11■□□□□ 0.01
SHC1P29353 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.11■□□□□ 0.01
SHC1P29353 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.11■□□□□ 0.01
SHC1P29353 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SHC1P29353 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SHC1P29353 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SHC1P29353 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SHC1P29353 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.1■□□□□ 0.01
SHC1P29353 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHC1P29353 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
SHC1P29353 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHC1P29353 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SHC1P29353 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.1■□□□□ 0.01
SHC1P29353 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHC1P29353 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.1■□□□□ 0.01
SHC1P29353 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHC1P29353 ALOX12P2-203ENST00000570921 1945 ntBASIC15.1■□□□□ 0.01
SHC1P29353 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
SHC1P29353 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.1■□□□□ 0.01
SHC1P29353 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.1■□□□□ 0.01
SHC1P29353 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SHC1P29353 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms