Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 AC106795.1-205ENST00000512851 1056 ntBASIC16.05■□□□□ 0.16
EPHA3P29320 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.05■□□□□ 0.16
EPHA3P29320 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 AC138894.3-201ENST00000603787 634 ntBASIC16.05■□□□□ 0.16
EPHA3P29320 NPAP1P7-201ENST00000613027 823 ntBASIC16.05■□□□□ 0.16
EPHA3P29320 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 PI4KAP1-204ENST00000612579 1703 ntBASIC16.05■□□□□ 0.16
EPHA3P29320 PPT1-215ENST00000641471 2368 ntBASIC16.05■□□□□ 0.16
EPHA3P29320 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.05■□□□□ 0.16
EPHA3P29320 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
EPHA3P29320 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
EPHA3P29320 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
EPHA3P29320 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA3P29320 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA3P29320 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.04■□□□□ 0.16
EPHA3P29320 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.04■□□□□ 0.16
EPHA3P29320 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.04■□□□□ 0.16
EPHA3P29320 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
EPHA3P29320 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA3P29320 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
EPHA3P29320 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 SLC25A6P2-201ENST00000497974 877 ntBASIC16.04■□□□□ 0.16
EPHA3P29320 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA3P29320 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA3P29320 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA3P29320 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA3P29320 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
EPHA3P29320 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.04■□□□□ 0.16
EPHA3P29320 AL139288.1-201ENST00000623748 933 ntBASIC16.04■□□□□ 0.16
EPHA3P29320 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.04■□□□□ 0.16
EPHA3P29320 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA3P29320 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA3P29320 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.04■□□□□ 0.16
EPHA3P29320 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
EPHA3P29320 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
EPHA3P29320 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.04■□□□□ 0.16
EPHA3P29320 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
EPHA3P29320 NORAD-201ENST00000565493 5339 ntBASIC16.04■□□□□ 0.16
EPHA3P29320 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
EPHA3P29320 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms