Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 IGHJ2P-201ENST00000454480 60 ntBASIC18.23■□□□□ 0.51
CTGFP29279 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.23■□□□□ 0.51
CTGFP29279 KRT90P-201ENST00000549264 1064 ntBASIC18.23■□□□□ 0.51
CTGFP29279 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CTGFP29279 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC18.23■□□□□ 0.51
CTGFP29279 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.23■□□□□ 0.51
CTGFP29279 GNRHR2-203ENST00000581100 1187 ntBASIC18.23■□□□□ 0.51
CTGFP29279 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CTGFP29279 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.23■□□□□ 0.51
CTGFP29279 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTGFP29279 AC005252.2-201ENST00000624630 1141 ntBASIC18.23■□□□□ 0.51
CTGFP29279 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTGFP29279 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.23■□□□□ 0.51
CTGFP29279 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTGFP29279 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.23■□□□□ 0.51
CTGFP29279 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTGFP29279 PP12613-201ENST00000424958 2230 ntBASIC18.23■□□□□ 0.51
CTGFP29279 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.23■□□□□ 0.51
CTGFP29279 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CTGFP29279 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTGFP29279 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CTGFP29279 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.23■□□□□ 0.51
CTGFP29279 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.23■□□□□ 0.51
CTGFP29279 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CTGFP29279 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CTGFP29279 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CTGFP29279 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC18.22■□□□□ 0.51
CTGFP29279 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.22■□□□□ 0.51
CTGFP29279 EEF1DP4-201ENST00000446006 880 ntBASIC18.22■□□□□ 0.51
CTGFP29279 AC012441.1-201ENST00000446669 685 ntBASIC18.22■□□□□ 0.51
CTGFP29279 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 AC093433.1-201ENST00000458048 571 ntBASIC18.22■□□□□ 0.51
CTGFP29279 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC18.22■□□□□ 0.51
CTGFP29279 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.22■□□□□ 0.51
CTGFP29279 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
CTGFP29279 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.22■□□□□ 0.51
CTGFP29279 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.22■□□□□ 0.51
CTGFP29279 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.22■□□□□ 0.51
CTGFP29279 AL390961.4-201ENST00000623958 2535 ntBASIC18.22■□□□□ 0.51
CTGFP29279 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CTGFP29279 AC134312.5-201ENST00000568031 1313 ntBASIC18.22■□□□□ 0.51
CTGFP29279 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.21■□□□□ 0.51
CTGFP29279 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.21■□□□□ 0.51
CTGFP29279 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.21■□□□□ 0.51
CTGFP29279 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 SOCS2P1-201ENST00000417727 557 ntBASIC18.21■□□□□ 0.51
CTGFP29279 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.21■□□□□ 0.51
CTGFP29279 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
CTGFP29279 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
CTGFP29279 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.21■□□□□ 0.51
CTGFP29279 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.21■□□□□ 0.51
CTGFP29279 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.21■□□□□ 0.51
CTGFP29279 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.21■□□□□ 0.51
CTGFP29279 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 AC120045.2-201ENST00000567334 178 ntBASIC18.21■□□□□ 0.51
CTGFP29279 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.21■□□□□ 0.51
CTGFP29279 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.21■□□□□ 0.51
CTGFP29279 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.21■□□□□ 0.51
CTGFP29279 AC008687.7-202ENST00000637404 953 ntBASIC18.21■□□□□ 0.51
CTGFP29279 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CTGFP29279 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms