Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
BCKDHBP21953 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.13■□□□□ 0.17
BCKDHBP21953 AL139011.1-202ENST00000642063 584 ntBASIC16.13■□□□□ 0.17
BCKDHBP21953 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
BCKDHBP21953 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 AC068880.1-201ENST00000507289 2297 ntBASIC16.13■□□□□ 0.17
BCKDHBP21953 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 AL645728.1-201ENST00000366221 2101 ntBASIC16.13■□□□□ 0.17
BCKDHBP21953 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
BCKDHBP21953 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.13■□□□□ 0.17
BCKDHBP21953 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
BCKDHBP21953 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHBP21953 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
BCKDHBP21953 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHBP21953 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 AL031731.1-201ENST00000642131 2094 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BCKDHBP21953 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
BCKDHBP21953 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHBP21953 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 CLK3P2-201ENST00000427566 1453 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 FAM86MP-201ENST00000340703 885 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.12■□□□□ 0.17
BCKDHBP21953 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.12■□□□□ 0.17
BCKDHBP21953 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.12■□□□□ 0.17
BCKDHBP21953 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHBP21953 BNIP3P42-201ENST00000454982 569 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
BCKDHBP21953 AP005482.1-201ENST00000563722 1273 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 AC025048.3-201ENST00000590609 569 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.12■□□□□ 0.17
BCKDHBP21953 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.12■□□□□ 0.17
BCKDHBP21953 BNIP3P29-201ENST00000598302 571 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 TMEM261P1-201ENST00000604899 340 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 AC074044.1-201ENST00000609673 707 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 AC011447.5-201ENST00000616168 564 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 AC005702.4-201ENST00000618393 416 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 AL033527.5-201ENST00000641382 801 ntBASIC16.12■□□□□ 0.17
BCKDHBP21953 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
BCKDHBP21953 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.12■□□□□ 0.17
BCKDHBP21953 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
BCKDHBP21953 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
BCKDHBP21953 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
BCKDHBP21953 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
BCKDHBP21953 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.11■□□□□ 0.17
BCKDHBP21953 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.11■□□□□ 0.17
BCKDHBP21953 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
BCKDHBP21953 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
BCKDHBP21953 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.11■□□□□ 0.17
BCKDHBP21953 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.11■□□□□ 0.17
BCKDHBP21953 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
BCKDHBP21953 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.11■□□□□ 0.17
BCKDHBP21953 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.11■□□□□ 0.17
BCKDHBP21953 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.11■□□□□ 0.17
BCKDHBP21953 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.11■□□□□ 0.17
BCKDHBP21953 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BCKDHBP21953 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms