Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.57■□□□□ 0.24
THRAP10827 HTR5BP-201ENST00000430851 1154 ntBASIC16.57■□□□□ 0.24
THRAP10827 MKNK2P1-201ENST00000437526 628 ntBASIC16.57■□□□□ 0.24
THRAP10827 RHOQP3-201ENST00000437982 621 ntBASIC16.57■□□□□ 0.24
THRAP10827 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.57■□□□□ 0.24
THRAP10827 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.57■□□□□ 0.24
THRAP10827 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.57■□□□□ 0.24
THRAP10827 AC004877.2-201ENST00000623941 599 ntBASIC16.57■□□□□ 0.24
THRAP10827 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THRAP10827 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
THRAP10827 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
THRAP10827 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THRAP10827 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.57■□□□□ 0.24
THRAP10827 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
THRAP10827 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
THRAP10827 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
THRAP10827 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 AL135999.2-201ENST00000622438 1686 ntBASIC16.56■□□□□ 0.24
THRAP10827 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 TSPY26P-202ENST00000565928 3884 ntBASIC16.56■□□□□ 0.24
THRAP10827 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 FRMD8P1-201ENST00000440433 1524 ntBASIC16.56■□□□□ 0.24
THRAP10827 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
THRAP10827 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
THRAP10827 BCAR1-209ENST00000546196 1340 ntBASIC16.56■□□□□ 0.24
THRAP10827 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.56■□□□□ 0.24
THRAP10827 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.56■□□□□ 0.24
THRAP10827 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
THRAP10827 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 KRT19P2-202ENST00000557173 1012 ntBASIC16.56■□□□□ 0.24
THRAP10827 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.56■□□□□ 0.24
THRAP10827 AL078644.1-201ENST00000609881 752 ntBASIC16.56■□□□□ 0.24
THRAP10827 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.56■□□□□ 0.24
THRAP10827 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
THRAP10827 AL391256.1-201ENST00000443260 1855 ntBASIC16.56■□□□□ 0.24
THRAP10827 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.56■□□□□ 0.24
THRAP10827 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.56■□□□□ 0.24
THRAP10827 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.56■□□□□ 0.24
THRAP10827 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
THRAP10827 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 PAUPAR-201ENST00000630360 2965 ntBASIC16.55■□□□□ 0.24
THRAP10827 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
THRAP10827 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
THRAP10827 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.55■□□□□ 0.24
THRAP10827 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
THRAP10827 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 AL596442.2-201ENST00000610240 980 ntBASIC16.55■□□□□ 0.24
THRAP10827 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.55■□□□□ 0.24
THRAP10827 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.55■□□□□ 0.24
THRAP10827 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
THRAP10827 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms