Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.04■□□□□ 0.32
CD48P09326 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
CD48P09326 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 AC074386.1-202ENST00000463561 864 ntBASIC17.04■□□□□ 0.32
CD48P09326 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.04■□□□□ 0.32
CD48P09326 AP002472.1-201ENST00000577490 586 ntBASIC17.04■□□□□ 0.32
CD48P09326 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.04■□□□□ 0.32
CD48P09326 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.04■□□□□ 0.32
CD48P09326 AL078644.1-201ENST00000609881 752 ntBASIC17.04■□□□□ 0.32
CD48P09326 AC027601.4-201ENST00000611259 610 ntBASIC17.04■□□□□ 0.32
CD48P09326 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CD48P09326 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CD48P09326 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CD48P09326 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD48P09326 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD48P09326 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CD48P09326 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CD48P09326 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 RNA5SP416-201ENST00000516838 111 ntBASIC17.03■□□□□ 0.32
CD48P09326 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.03■□□□□ 0.32
CD48P09326 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CD48P09326 AC068137.2-201ENST00000605408 478 ntBASIC17.03■□□□□ 0.32
CD48P09326 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 CROCCP1-201ENST00000426910 5675 ntBASIC17.03■□□□□ 0.32
CD48P09326 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.03■□□□□ 0.32
CD48P09326 AC022188.1-201ENST00000620960 1664 ntBASIC17.03■□□□□ 0.32
CD48P09326 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CD48P09326 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.03■□□□□ 0.32
CD48P09326 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.02■□□□□ 0.32
CD48P09326 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.02■□□□□ 0.32
CD48P09326 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CD48P09326 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 MIR940-201ENST00000401276 94 ntBASIC17.02■□□□□ 0.32
CD48P09326 AC093724.1-201ENST00000448659 1027 ntBASIC17.02■□□□□ 0.32
CD48P09326 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.02■□□□□ 0.32
CD48P09326 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CD48P09326 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms