Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.91■□□□□ 0.3
RHOP08100 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.91■□□□□ 0.3
RHOP08100 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.91■□□□□ 0.3
RHOP08100 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.91■□□□□ 0.3
RHOP08100 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.91■□□□□ 0.3
RHOP08100 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.91■□□□□ 0.3
RHOP08100 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RHOP08100 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.91■□□□□ 0.3
RHOP08100 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.91■□□□□ 0.3
RHOP08100 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RHOP08100 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RHOP08100 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.9■□□□□ 0.3
RHOP08100 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.9■□□□□ 0.3
RHOP08100 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.9■□□□□ 0.3
RHOP08100 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.9■□□□□ 0.3
RHOP08100 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
RHOP08100 U82695.1-201ENST00000635752 1889 ntBASIC16.9■□□□□ 0.3
RHOP08100 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 LINC01144-201ENST00000626198 1710 ntBASIC16.9■□□□□ 0.3
RHOP08100 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.9■□□□□ 0.3
RHOP08100 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RHOP08100 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RHOP08100 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RHOP08100 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
RHOP08100 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.89■□□□□ 0.29
RHOP08100 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RHOP08100 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.89■□□□□ 0.29
RHOP08100 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.89■□□□□ 0.29
RHOP08100 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 MYCLP2-201ENST00000449268 967 ntBASIC16.89■□□□□ 0.29
RHOP08100 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.89■□□□□ 0.29
RHOP08100 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RHOP08100 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.89■□□□□ 0.29
RHOP08100 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.89■□□□□ 0.29
RHOP08100 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RHOP08100 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.89■□□□□ 0.29
RHOP08100 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.89■□□□□ 0.29
RHOP08100 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.89■□□□□ 0.29
RHOP08100 AL365330.1-201ENST00000607459 531 ntBASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms