Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.82□□□□□ -0.04
SPTA1P02549 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
SPTA1P02549 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 KLF2P4-201ENST00000451959 1225 ntBASIC14.82□□□□□ -0.04
SPTA1P02549 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.82□□□□□ -0.04
SPTA1P02549 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.82□□□□□ -0.04
SPTA1P02549 AP000812.2-201ENST00000538934 718 ntBASIC14.82□□□□□ -0.04
SPTA1P02549 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.82□□□□□ -0.04
SPTA1P02549 AC016629.1-201ENST00000596579 586 ntBASIC14.82□□□□□ -0.04
SPTA1P02549 LINC01451-201ENST00000623792 534 ntBASIC14.82□□□□□ -0.04
SPTA1P02549 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPTA1P02549 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SPTA1P02549 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.82□□□□□ -0.04
SPTA1P02549 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.82□□□□□ -0.04
SPTA1P02549 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
SPTA1P02549 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.82□□□□□ -0.04
SPTA1P02549 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.82□□□□□ -0.04
SPTA1P02549 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.82□□□□□ -0.04
SPTA1P02549 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC14.82□□□□□ -0.04
SPTA1P02549 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SPTA1P02549 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.82□□□□□ -0.04
SPTA1P02549 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.81□□□□□ -0.04
SPTA1P02549 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 TOP3BP1-201ENST00000420768 1380 ntBASIC14.81□□□□□ -0.04
SPTA1P02549 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.81□□□□□ -0.04
SPTA1P02549 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC14.81□□□□□ -0.04
SPTA1P02549 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.81□□□□□ -0.04
SPTA1P02549 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.81□□□□□ -0.04
SPTA1P02549 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 AC133963.1-201ENST00000504166 1679 ntBASIC14.81□□□□□ -0.04
SPTA1P02549 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.81□□□□□ -0.04
SPTA1P02549 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.81□□□□□ -0.04
SPTA1P02549 RPS2P36-201ENST00000456516 831 ntBASIC14.81□□□□□ -0.04
SPTA1P02549 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.81□□□□□ -0.04
SPTA1P02549 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SPTA1P02549 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.81□□□□□ -0.04
SPTA1P02549 SPCS2P2-201ENST00000603270 608 ntBASIC14.81□□□□□ -0.04
SPTA1P02549 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.81□□□□□ -0.04
SPTA1P02549 AL021578.1-201ENST00000613646 709 ntBASIC14.81□□□□□ -0.04
SPTA1P02549 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms