Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TRUB2O95900 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.22■□□□□ 0.35
TRUB2O95900 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.22■□□□□ 0.35
TRUB2O95900 AP006288.1-201ENST00000446065 395 ntBASIC17.22■□□□□ 0.35
TRUB2O95900 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.22■□□□□ 0.35
TRUB2O95900 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRUB2O95900 AC079140.1-201ENST00000508039 487 ntBASIC17.22■□□□□ 0.35
TRUB2O95900 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.22■□□□□ 0.35
TRUB2O95900 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.22■□□□□ 0.35
TRUB2O95900 AC022145.2-201ENST00000598203 171 ntBASIC17.22■□□□□ 0.35
TRUB2O95900 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.22■□□□□ 0.35
TRUB2O95900 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 AL513210.1-201ENST00000629608 234 ntBASIC17.22■□□□□ 0.35
TRUB2O95900 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.22■□□□□ 0.35
TRUB2O95900 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.22■□□□□ 0.35
TRUB2O95900 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.22■□□□□ 0.35
TRUB2O95900 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TRUB2O95900 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRUB2O95900 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.21■□□□□ 0.35
TRUB2O95900 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.21■□□□□ 0.35
TRUB2O95900 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 PCDHA1-201ENST00000378133 2726 ntBASIC17.21■□□□□ 0.35
TRUB2O95900 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 AC006449.6-201ENST00000612330 2296 ntBASIC17.21■□□□□ 0.35
TRUB2O95900 REXO1L8P-201ENST00000604378 1897 ntBASIC17.21■□□□□ 0.35
TRUB2O95900 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.21■□□□□ 0.35
TRUB2O95900 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRUB2O95900 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.21■□□□□ 0.35
TRUB2O95900 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.21■□□□□ 0.35
TRUB2O95900 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.21■□□□□ 0.35
TRUB2O95900 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.21■□□□□ 0.35
TRUB2O95900 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.21■□□□□ 0.35
TRUB2O95900 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.21■□□□□ 0.35
TRUB2O95900 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.21■□□□□ 0.35
TRUB2O95900 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
TRUB2O95900 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRUB2O95900 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.21■□□□□ 0.35
TRUB2O95900 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRUB2O95900 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
TRUB2O95900 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.2■□□□□ 0.34
TRUB2O95900 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TRUB2O95900 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRUB2O95900 AC004461.1-201ENST00000412461 403 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 AC254562.1-201ENST00000417586 456 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 RPS8P6-201ENST00000426177 609 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.2■□□□□ 0.34
TRUB2O95900 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 DNAJB3-202ENST00000449667 1266 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 AP000344.2-201ENST00000512987 629 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.2■□□□□ 0.34
TRUB2O95900 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.2■□□□□ 0.34
TRUB2O95900 AL138918.1-201ENST00000568306 659 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.2■□□□□ 0.34
TRUB2O95900 GPALPP1-207ENST00000611650 899 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRUB2O95900 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 AC005622.1-201ENST00000636801 1703 ntBASIC17.2■□□□□ 0.34
TRUB2O95900 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.2■□□□□ 0.34
TRUB2O95900 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRUB2O95900 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRUB2O95900 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.2■□□□□ 0.34
TRUB2O95900 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms