Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 RN7SL589P-201ENST00000481268 310 ntBASIC15.15■□□□□ 0.02
NKX2-2O95096 AC105233.2-201ENST00000523697 349 ntBASIC15.15■□□□□ 0.02
NKX2-2O95096 AF228730.5-201ENST00000530288 346 ntBASIC15.15■□□□□ 0.02
NKX2-2O95096 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.15■□□□□ 0.02
NKX2-2O95096 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.15■□□□□ 0.02
NKX2-2O95096 AL365330.1-201ENST00000607459 531 ntBASIC15.15■□□□□ 0.02
NKX2-2O95096 AC026120.1-201ENST00000611536 926 ntBASIC15.15■□□□□ 0.02
NKX2-2O95096 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NKX2-2O95096 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NKX2-2O95096 PCDHA1-201ENST00000378133 2726 ntBASIC15.15■□□□□ 0.02
NKX2-2O95096 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NKX2-2O95096 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.14■□□□□ 0.01
NKX2-2O95096 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 HTR5BP-201ENST00000430851 1154 ntBASIC15.14■□□□□ 0.01
NKX2-2O95096 ALG1L5P-201ENST00000482043 771 ntBASIC15.14■□□□□ 0.01
NKX2-2O95096 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 AC243562.1-201ENST00000560672 389 ntBASIC15.14■□□□□ 0.01
NKX2-2O95096 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.14■□□□□ 0.01
NKX2-2O95096 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.14■□□□□ 0.01
NKX2-2O95096 AC008267.7-201ENST00000624570 1194 ntBASIC15.14■□□□□ 0.01
NKX2-2O95096 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NKX2-2O95096 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.14■□□□□ 0.01
NKX2-2O95096 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.14■□□□□ 0.01
NKX2-2O95096 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
NKX2-2O95096 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
NKX2-2O95096 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 AL603832.2-201ENST00000566195 2125 ntBASIC15.13■□□□□ 0.01
NKX2-2O95096 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
NKX2-2O95096 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
NKX2-2O95096 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.13■□□□□ 0.01
NKX2-2O95096 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.13■□□□□ 0.01
NKX2-2O95096 DNAJB3-201ENST00000446806 729 ntBASIC15.13■□□□□ 0.01
NKX2-2O95096 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
NKX2-2O95096 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.13■□□□□ 0.01
NKX2-2O95096 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.13■□□□□ 0.01
NKX2-2O95096 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NKX2-2O95096 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.13■□□□□ 0.01
NKX2-2O95096 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.13■□□□□ 0.01
NKX2-2O95096 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.13■□□□□ 0.01
NKX2-2O95096 AC027307.2-201ENST00000591252 911 ntBASIC15.13■□□□□ 0.01
NKX2-2O95096 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms