Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC21.39■■□□□ 1.01
LTN1O94822 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.39■■□□□ 1.01
LTN1O94822 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC21.39■■□□□ 1.01
LTN1O94822 ABBA01031660.1-201ENST00000635219 756 ntBASIC21.39■■□□□ 1.01
LTN1O94822 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LTN1O94822 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LTN1O94822 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC21.39■■□□□ 1.01
LTN1O94822 VILL-207ENST00000465644 1857 ntTSL 5 BASIC21.39■■□□□ 1.01
LTN1O94822 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LTN1O94822 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.39■■□□□ 1.01
LTN1O94822 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
LTN1O94822 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
LTN1O94822 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LTN1O94822 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
LTN1O94822 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LTN1O94822 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.39■■□□□ 1.01
LTN1O94822 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.39■■□□□ 1.01
LTN1O94822 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
LTN1O94822 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.39■■□□□ 1.01
LTN1O94822 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.39■■□□□ 1.01
LTN1O94822 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LTN1O94822 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
LTN1O94822 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
LTN1O94822 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LTN1O94822 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC21.38■■□□□ 1.01
LTN1O94822 SLED1-202ENST00000512051 380 ntBASIC21.38■■□□□ 1.01
LTN1O94822 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.38■■□□□ 1.01
LTN1O94822 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
LTN1O94822 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.38■■□□□ 1.01
LTN1O94822 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC21.38■■□□□ 1.01
LTN1O94822 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LTN1O94822 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
LTN1O94822 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.38■■□□□ 1.01
LTN1O94822 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LTN1O94822 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 SOCS2P1-201ENST00000417727 557 ntBASIC21.38■■□□□ 1.01
LTN1O94822 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.38■■□□□ 1.01
LTN1O94822 CTBP2P5-201ENST00000454986 1264 ntBASIC21.38■■□□□ 1.01
LTN1O94822 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
LTN1O94822 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.38■■□□□ 1.01
LTN1O94822 AC120045.2-201ENST00000567334 178 ntBASIC21.38■■□□□ 1.01
LTN1O94822 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC21.38■■□□□ 1.01
LTN1O94822 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC21.38■■□□□ 1.01
LTN1O94822 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC21.38■■□□□ 1.01
LTN1O94822 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LTN1O94822 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LTN1O94822 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.37■■□□□ 1.01
LTN1O94822 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.37■■□□□ 1.01
LTN1O94822 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.37■■□□□ 1.01
LTN1O94822 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.37■■□□□ 1.01
LTN1O94822 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC21.37■■□□□ 1.01
LTN1O94822 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 AC005229.1-201ENST00000392885 409 ntBASIC21.37■■□□□ 1.01
LTN1O94822 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.37■■□□□ 1.01
LTN1O94822 ELP6-209ENST00000446787 894 ntTSL 3 BASIC21.37■■□□□ 1.01
LTN1O94822 FAM86LP-201ENST00000478302 853 ntBASIC21.37■■□□□ 1.01
LTN1O94822 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC21.37■■□□□ 1.01
LTN1O94822 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LTN1O94822 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
LTN1O94822 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.37■■□□□ 1.01
LTN1O94822 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LTN1O94822 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 AC099336.1-201ENST00000417053 1171 ntBASIC21.36■■□□□ 1.01
LTN1O94822 USB1-202ENST00000423271 1217 ntTSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.36■■□□□ 1.01
LTN1O94822 TIMM17BP1-201ENST00000545713 516 ntBASIC21.36■■□□□ 1.01
LTN1O94822 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LTN1O94822 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.36■■□□□ 1.01
LTN1O94822 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
LTN1O94822 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC21.36■■□□□ 1.01
LTN1O94822 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC21.36■■□□□ 1.01
LTN1O94822 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
LTN1O94822 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LTN1O94822 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms