Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC7.19□□□□□ -1.26
USH2AO75445 DDX39AP1-201ENST00000445147 1181 ntBASIC7.19□□□□□ -1.26
USH2AO75445 RN7SL8P-201ENST00000461771 266 ntBASIC7.19□□□□□ -1.26
USH2AO75445 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 AL118516.1-201ENST00000564152 670 ntBASIC7.19□□□□□ -1.26
USH2AO75445 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 KRT8P49-201ENST00000604166 1432 ntBASIC7.19□□□□□ -1.26
USH2AO75445 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 SMS-201ENST00000379404 1174 ntTSL 3 BASIC7.19□□□□□ -1.26
USH2AO75445 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC7.19□□□□□ -1.26
USH2AO75445 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC7.19□□□□□ -1.26
USH2AO75445 AC097065.1-201ENST00000425737 517 ntBASIC7.19□□□□□ -1.26
USH2AO75445 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 AL353726.2-201ENST00000623259 884 ntBASIC7.19□□□□□ -1.26
USH2AO75445 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC7.19□□□□□ -1.26
USH2AO75445 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC7.19□□□□□ -1.26
USH2AO75445 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USH2AO75445 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC7.19□□□□□ -1.26
USH2AO75445 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 FAU-202ENST00000434372 533 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 BRI3P1-201ENST00000440440 378 ntBASIC7.18□□□□□ -1.26
USH2AO75445 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 METTL26-214ENST00000614890 801 ntTSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 PC-204ENST00000524491 1714 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 TBCB-211ENST00000589996 724 ntTSL 3 BASIC7.18□□□□□ -1.26
USH2AO75445 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC7.18□□□□□ -1.26
USH2AO75445 ECM1P1-201ENST00000604092 1279 ntBASIC7.18□□□□□ -1.26
USH2AO75445 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
USH2AO75445 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC7.18□□□□□ -1.26
USH2AO75445 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
USH2AO75445 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC7.18□□□□□ -1.26
USH2AO75445 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms