Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AC136604.1-201ENST00000418535 575 ntBASIC20.41■□□□□ 0.86
CACNA1FO60840 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CACNA1FO60840 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.41■□□□□ 0.86
CACNA1FO60840 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.41■□□□□ 0.86
CACNA1FO60840 LINC01115-203ENST00000606068 577 ntBASIC20.41■□□□□ 0.86
CACNA1FO60840 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.41■□□□□ 0.86
CACNA1FO60840 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 AC134407.2-201ENST00000625089 1978 ntBASIC20.41■□□□□ 0.86
CACNA1FO60840 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 SLC7A15P-201ENST00000424028 1363 ntBASIC20.41■□□□□ 0.86
CACNA1FO60840 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC20.41■□□□□ 0.86
CACNA1FO60840 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 AC025048.3-201ENST00000590609 569 ntBASIC20.41■□□□□ 0.86
CACNA1FO60840 AC005702.4-201ENST00000618393 416 ntBASIC20.41■□□□□ 0.86
CACNA1FO60840 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.41■□□□□ 0.86
CACNA1FO60840 AL109936.8-201ENST00000641772 604 ntBASIC20.41■□□□□ 0.86
CACNA1FO60840 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.41■□□□□ 0.86
CACNA1FO60840 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CACNA1FO60840 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CACNA1FO60840 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CACNA1FO60840 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.4■□□□□ 0.86
CACNA1FO60840 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.4■□□□□ 0.86
CACNA1FO60840 FO393414.2-201ENST00000405153 598 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.4■□□□□ 0.86
CACNA1FO60840 AC002472.2-201ENST00000442739 958 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 PHKG1P2-201ENST00000457537 863 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.4■□□□□ 0.86
CACNA1FO60840 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.4■□□□□ 0.86
CACNA1FO60840 AL450472.2-201ENST00000603663 1156 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CACNA1FO60840 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.4■□□□□ 0.86
CACNA1FO60840 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.4■□□□□ 0.86
CACNA1FO60840 AL513523.2-202ENST00000427283 2040 ntBASIC20.4■□□□□ 0.86
CACNA1FO60840 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CACNA1FO60840 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC20.39■□□□□ 0.86
CACNA1FO60840 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1FO60840 AC084018.2-201ENST00000613093 2607 ntBASIC20.39■□□□□ 0.86
CACNA1FO60840 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1FO60840 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC20.39■□□□□ 0.86
CACNA1FO60840 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.39■□□□□ 0.86
CACNA1FO60840 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.39■□□□□ 0.86
CACNA1FO60840 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1FO60840 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1FO60840 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1FO60840 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CACNA1FO60840 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CACNA1FO60840 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.39■□□□□ 0.85
CACNA1FO60840 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC20.39■□□□□ 0.85
CACNA1FO60840 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.39■□□□□ 0.85
CACNA1FO60840 AC104794.3-201ENST00000566840 1248 ntBASIC20.39■□□□□ 0.85
CACNA1FO60840 RN7SL204P-201ENST00000582831 262 ntBASIC20.39■□□□□ 0.85
CACNA1FO60840 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.39■□□□□ 0.85
CACNA1FO60840 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.39■□□□□ 0.85
CACNA1FO60840 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CACNA1FO60840 AL603832.2-201ENST00000566195 2125 ntBASIC20.38■□□□□ 0.85
CACNA1FO60840 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms