Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AL596325.1-201ENST00000563991 1082 ntBASIC16.31■□□□□ 0.2
PCDHGA12O60330 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGA12O60330 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGA12O60330 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 CICP6-201ENST00000457191 2729 ntBASIC16.3■□□□□ 0.2
PCDHGA12O60330 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 HLA-V-204ENST00000476601 1289 ntBASIC16.3■□□□□ 0.2
PCDHGA12O60330 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PCDHGA12O60330 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PCDHGA12O60330 AC011270.2-201ENST00000624293 2550 ntBASIC16.3■□□□□ 0.2
PCDHGA12O60330 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 AC016396.2-201ENST00000562575 1417 ntBASIC16.29■□□□□ 0.2
PCDHGA12O60330 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 KRT18P34-201ENST00000488218 1270 ntBASIC16.29■□□□□ 0.2
PCDHGA12O60330 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 SPDYE12P-201ENST00000618416 771 ntBASIC16.29■□□□□ 0.2
PCDHGA12O60330 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 AP3S2-216ENST00000617003 1561 ntBASIC16.29■□□□□ 0.2
PCDHGA12O60330 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHGA12O60330 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHGA12O60330 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHGA12O60330 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHGA12O60330 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms