Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.32□□□□□ -0.6
NDUFA1O15239 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
NDUFA1O15239 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
NDUFA1O15239 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
NDUFA1O15239 TP73-AS1-210ENST00000637775 1455 ntBASIC11.32□□□□□ -0.6
NDUFA1O15239 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 AC023157.3-201ENST00000619086 2088 ntBASIC11.31□□□□□ -0.6
NDUFA1O15239 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 RCN1P1-201ENST00000400413 996 ntBASIC11.31□□□□□ -0.6
NDUFA1O15239 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC11.31□□□□□ -0.6
NDUFA1O15239 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC11.31□□□□□ -0.6
NDUFA1O15239 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 AC013467.2-201ENST00000605472 835 ntBASIC11.31□□□□□ -0.6
NDUFA1O15239 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 AD001527.2-201ENST00000622994 785 ntBASIC11.31□□□□□ -0.6
NDUFA1O15239 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC11.31□□□□□ -0.6
NDUFA1O15239 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
NDUFA1O15239 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC11.31□□□□□ -0.6
NDUFA1O15239 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.31□□□□□ -0.6
NDUFA1O15239 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
NDUFA1O15239 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
NDUFA1O15239 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.3□□□□□ -0.6
NDUFA1O15239 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC097637.2-201ENST00000624096 1997 ntBASIC11.3□□□□□ -0.6
NDUFA1O15239 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 AC132938.5-201ENST00000624980 1813 ntBASIC11.3□□□□□ -0.6
NDUFA1O15239 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.3□□□□□ -0.6
NDUFA1O15239 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
NDUFA1O15239 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC11.3□□□□□ -0.6
NDUFA1O15239 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.3□□□□□ -0.6
NDUFA1O15239 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
NDUFA1O15239 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
NDUFA1O15239 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms