Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
CHD2O14647 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 GUK1-206ENST00000366723 845 ntTSL 5 BASIC22.37■■□□□ 1.17
CHD2O14647 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 AL591846.1-201ENST00000451736 433 ntBASIC22.37■■□□□ 1.17
CHD2O14647 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC22.37■■□□□ 1.17
CHD2O14647 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC22.37■■□□□ 1.17
CHD2O14647 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
CHD2O14647 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CHD2O14647 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC22.37■■□□□ 1.17
CHD2O14647 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
CHD2O14647 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CHD2O14647 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD2O14647 AHRR-211ENST00000515206 462 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD2O14647 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD2O14647 FOS-206ENST00000555347 1280 ntTSL 2 BASIC22.36■■□□□ 1.17
CHD2O14647 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC22.36■■□□□ 1.17
CHD2O14647 AC009486.1-201ENST00000569860 813 ntBASIC22.36■■□□□ 1.17
CHD2O14647 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD2O14647 AL607033.1-201ENST00000623900 1599 ntBASIC22.36■■□□□ 1.17
CHD2O14647 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD2O14647 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC22.36■■□□□ 1.17
CHD2O14647 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CHD2O14647 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC22.36■■□□□ 1.17
CHD2O14647 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC22.36■■□□□ 1.17
CHD2O14647 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC22.36■■□□□ 1.17
CHD2O14647 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 HNRNPUP1-201ENST00000554987 333 ntBASIC22.36■■□□□ 1.17
CHD2O14647 HNRNPA1P48-202ENST00000565308 961 ntBASIC22.36■■□□□ 1.17
CHD2O14647 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC22.36■■□□□ 1.17
CHD2O14647 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC22.36■■□□□ 1.17
CHD2O14647 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC22.36■■□□□ 1.17
CHD2O14647 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CHD2O14647 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHD2O14647 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
CHD2O14647 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD2O14647 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC22.35■■□□□ 1.17
CHD2O14647 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC22.35■■□□□ 1.17
CHD2O14647 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHD2O14647 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD2O14647 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD2O14647 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CHD2O14647 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC22.35■■□□□ 1.17
CHD2O14647 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CHD2O14647 ELP6-209ENST00000446787 894 ntTSL 3 BASIC22.35■■□□□ 1.17
CHD2O14647 IFT20-206ENST00000578122 834 ntTSL 2 BASIC22.35■■□□□ 1.17
CHD2O14647 IFT20-208ENST00000578985 831 ntTSL 3 BASIC22.35■■□□□ 1.17
CHD2O14647 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
CHD2O14647 NEFHP1-201ENST00000412845 2629 ntBASIC22.35■■□□□ 1.17
CHD2O14647 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
CHD2O14647 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CHD2O14647 AC138028.6-201ENST00000616106 1482 ntBASIC22.34■■□□□ 1.17
CHD2O14647 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC22.34■■□□□ 1.17
CHD2O14647 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 PFN2-215ENST00000497148 743 ntTSL 4 BASIC22.34■■□□□ 1.17
CHD2O14647 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC22.34■■□□□ 1.17
CHD2O14647 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC22.34■■□□□ 1.17
CHD2O14647 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHD2O14647 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC22.34■■□□□ 1.17
CHD2O14647 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC22.34■■□□□ 1.17
CHD2O14647 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
CHD2O14647 GRN-222ENST00000639447 1314 ntTSL 2 BASIC22.34■■□□□ 1.17
CHD2O14647 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CHD2O14647 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC22.34■■□□□ 1.17
CHD2O14647 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
CHD2O14647 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CHD2O14647 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
CHD2O14647 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC22.34■■□□□ 1.17
CHD2O14647 Z93015.1-201ENST00000451718 390 ntBASIC22.34■■□□□ 1.17
CHD2O14647 ARTN-209ENST00000479128 471 ntTSL 3 BASIC22.34■■□□□ 1.17
CHD2O14647 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC22.34■■□□□ 1.17
CHD2O14647 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms