Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM1O00151 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
PDLIM1O00151 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PDLIM1O00151 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM1O00151 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PDLIM1O00151 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
PDLIM1O00151 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PDLIM1O00151 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
PDLIM1O00151 HLA-J-202ENST00000469281 1241 ntBASIC15.74■□□□□ 0.11
PDLIM1O00151 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.74■□□□□ 0.11
PDLIM1O00151 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.74■□□□□ 0.11
PDLIM1O00151 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 AC111152.3-201ENST00000569699 673 ntBASIC15.74■□□□□ 0.11
PDLIM1O00151 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.74■□□□□ 0.11
PDLIM1O00151 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.74■□□□□ 0.11
PDLIM1O00151 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.74■□□□□ 0.11
PDLIM1O00151 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PDLIM1O00151 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDLIM1O00151 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.73■□□□□ 0.11
PDLIM1O00151 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PDLIM1O00151 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PDLIM1O00151 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM1O00151 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM1O00151 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM1O00151 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.73■□□□□ 0.11
PDLIM1O00151 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.73■□□□□ 0.11
PDLIM1O00151 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM1O00151 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.73■□□□□ 0.11
PDLIM1O00151 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.73■□□□□ 0.11
PDLIM1O00151 BNIP3P18-201ENST00000593976 575 ntBASIC15.73■□□□□ 0.11
PDLIM1O00151 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PDLIM1O00151 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.73■□□□□ 0.11
PDLIM1O00151 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PDLIM1O00151 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDLIM1O00151 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PDLIM1O00151 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms