Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 AC008741.2-201ENST00000612792 3115 ntBASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 ADH5P3-201ENST00000433842 1137 ntBASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 RFPL4AP1-201ENST00000530883 850 ntBASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 AC093028.1-201ENST00000622998 982 ntBASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PTPDC1A2A3K4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 AL645939.2-201ENST00000427340 991 ntBASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 AC026120.1-201ENST00000611536 926 ntBASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 AC106028.4-201ENST00000614509 607 ntBASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPDC1A2A3K4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PTPDC1A2A3K4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 AL139400.1-201ENST00000366220 510 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 RNU1-129P-201ENST00000384064 167 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 SPDYE11-202ENST00000450699 704 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 CYMP-203ENST00000474680 1263 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 AC004449.1-201ENST00000564240 433 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 SPDYE9P-201ENST00000570642 692 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 U1.21-201ENST00000580816 167 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 SPDYE10P-202ENST00000612005 668 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 SPDYE8P-202ENST00000612377 668 ntBASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPDC1A2A3K4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms