Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMCO4Q9NRQ5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMCO4Q9NRQ5 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.73■□□□□ 0.59
SMCO4Q9NRQ5 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 AC137767.1-201ENST00000602918 1920 ntBASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMCO4Q9NRQ5 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMCO4Q9NRQ5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
SMCO4Q9NRQ5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
SMCO4Q9NRQ5 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SMCO4Q9NRQ5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMCO4Q9NRQ5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.7■□□□□ 0.58
SMCO4Q9NRQ5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.7■□□□□ 0.58
SMCO4Q9NRQ5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMCO4Q9NRQ5 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
SMCO4Q9NRQ5 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMCO4Q9NRQ5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 AP003733.4-201ENST00000623785 1697 ntBASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMCO4Q9NRQ5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 AC233723.2-201ENST00000623798 2106 ntBASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMCO4Q9NRQ5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 AC127502.1-201ENST00000399971 1502 ntBASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMCO4Q9NRQ5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.65■□□□□ 0.58
SMCO4Q9NRQ5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO4Q9NRQ5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.65■□□□□ 0.58
SMCO4Q9NRQ5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SMCO4Q9NRQ5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SMCO4Q9NRQ5 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.65■□□□□ 0.58
SMCO4Q9NRQ5 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.64■□□□□ 0.58
SMCO4Q9NRQ5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
SMCO4Q9NRQ5 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 AC141586.4-201ENST00000624558 1573 ntBASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.64■□□□□ 0.57
SMCO4Q9NRQ5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMCO4Q9NRQ5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms