Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
CDH23Q9H251 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.73■■□□□ 1.71
CDH23Q9H251 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CDH23Q9H251 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.72■■□□□ 1.71
CDH23Q9H251 AP002414.2-202ENST00000590929 1450 ntBASIC25.72■■□□□ 1.71
CDH23Q9H251 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.72■■□□□ 1.71
CDH23Q9H251 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CDH23Q9H251 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CDH23Q9H251 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CDH23Q9H251 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.72■■□□□ 1.71
CDH23Q9H251 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDH23Q9H251 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDH23Q9H251 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CDH23Q9H251 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.7■■□□□ 1.71
CDH23Q9H251 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
CDH23Q9H251 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
CDH23Q9H251 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
CDH23Q9H251 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDH23Q9H251 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.7■■□□□ 1.7
CDH23Q9H251 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDH23Q9H251 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDH23Q9H251 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.7■■□□□ 1.7
CDH23Q9H251 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CDH23Q9H251 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.7■■□□□ 1.7
CDH23Q9H251 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC25.7■■□□□ 1.7
CDH23Q9H251 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.69■■□□□ 1.7
CDH23Q9H251 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
CDH23Q9H251 BX255925.1-201ENST00000566954 1854 ntBASIC25.69■■□□□ 1.7
CDH23Q9H251 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.69■■□□□ 1.7
CDH23Q9H251 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.68■■□□□ 1.7
CDH23Q9H251 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDH23Q9H251 AC105265.2-201ENST00000467189 838 ntBASIC25.68■■□□□ 1.7
CDH23Q9H251 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CDH23Q9H251 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDH23Q9H251 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDH23Q9H251 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CDH23Q9H251 MIR939-201ENST00000401314 82 ntBASIC25.68■■□□□ 1.7
CDH23Q9H251 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.68■■□□□ 1.7
CDH23Q9H251 AL356740.2-201ENST00000601559 647 ntBASIC25.68■■□□□ 1.7
CDH23Q9H251 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CDH23Q9H251 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CDH23Q9H251 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDH23Q9H251 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDH23Q9H251 AC024257.2-201ENST00000549699 147 ntBASIC25.67■■□□□ 1.7
CDH23Q9H251 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CDH23Q9H251 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
CDH23Q9H251 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH23Q9H251 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC25.66■■□□□ 1.7
CDH23Q9H251 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH23Q9H251 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CDH23Q9H251 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.66■■□□□ 1.7
CDH23Q9H251 EXOG-217ENST00000630638 197 ntTSL 5 BASIC25.66■■□□□ 1.7
CDH23Q9H251 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH23Q9H251 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CDH23Q9H251 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CDH23Q9H251 RARRES2P11-201ENST00000635158 484 ntBASIC25.65■■□□□ 1.7
CDH23Q9H251 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
CDH23Q9H251 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
CDH23Q9H251 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDH23Q9H251 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDH23Q9H251 AL136967.2-201ENST00000623968 743 ntBASIC25.64■■□□□ 1.7
CDH23Q9H251 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.64■■□□□ 1.7
CDH23Q9H251 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CDH23Q9H251 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDH23Q9H251 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDH23Q9H251 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
CDH23Q9H251 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
CDH23Q9H251 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.63■■□□□ 1.69
CDH23Q9H251 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDH23Q9H251 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDH23Q9H251 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.62■■□□□ 1.69
CDH23Q9H251 AF131216.4-201ENST00000638924 1588 ntBASIC25.62■■□□□ 1.69
CDH23Q9H251 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CDH23Q9H251 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.62■■□□□ 1.69
CDH23Q9H251 UNC93B3-201ENST00000308076 687 ntBASIC25.62■■□□□ 1.69
CDH23Q9H251 EDA-201ENST00000338901 1233 ntBASIC25.62■■□□□ 1.69
CDH23Q9H251 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CDH23Q9H251 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDH23Q9H251 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH23Q9H251 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH23Q9H251 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.61■■□□□ 1.69
CDH23Q9H251 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH23Q9H251 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.61■■□□□ 1.69
CDH23Q9H251 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CDH23Q9H251 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.6■■□□□ 1.69
CDH23Q9H251 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDH23Q9H251 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.6■■□□□ 1.69
CDH23Q9H251 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
CDH23Q9H251 AP001330.3-201ENST00000520123 633 ntBASIC25.6■■□□□ 1.69
CDH23Q9H251 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CDH23Q9H251 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.6■■□□□ 1.69
CDH23Q9H251 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDH23Q9H251 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.59■■□□□ 1.69
CDH23Q9H251 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.59■■□□□ 1.69
CDH23Q9H251 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.59■■□□□ 1.69
CDH23Q9H251 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDH23Q9H251 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDH23Q9H251 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDH23Q9H251 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.59■■□□□ 1.69
CDH23Q9H251 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms