Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
NEK1Q96PY6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
NEK1Q96PY6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NEK1Q96PY6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
NEK1Q96PY6 ABHD17AP5-201ENST00000580133 923 ntBASIC28.15■■■□□ 2.1
NEK1Q96PY6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NEK1Q96PY6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
NEK1Q96PY6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NEK1Q96PY6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NEK1Q96PY6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
NEK1Q96PY6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
NEK1Q96PY6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
NEK1Q96PY6 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
NEK1Q96PY6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NEK1Q96PY6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NEK1Q96PY6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
NEK1Q96PY6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.13■■■□□ 2.09
NEK1Q96PY6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
NEK1Q96PY6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.13■■■□□ 2.09
NEK1Q96PY6 AC138932.3-201ENST00000567634 1902 ntBASIC28.13■■■□□ 2.09
NEK1Q96PY6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC28.12■■■□□ 2.09
NEK1Q96PY6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.12■■■□□ 2.09
NEK1Q96PY6 AC018755.3-202ENST00000596210 929 ntBASIC28.12■■■□□ 2.09
NEK1Q96PY6 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
NEK1Q96PY6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
NEK1Q96PY6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
NEK1Q96PY6 KRT18P60-201ENST00000312876 1297 ntBASIC28.11■■■□□ 2.09
NEK1Q96PY6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.11■■■□□ 2.09
NEK1Q96PY6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
NEK1Q96PY6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
NEK1Q96PY6 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC28.11■■■□□ 2.09
NEK1Q96PY6 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NEK1Q96PY6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NEK1Q96PY6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
NEK1Q96PY6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
NEK1Q96PY6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
NEK1Q96PY6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NEK1Q96PY6 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC28.1■■■□□ 2.09
NEK1Q96PY6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
NEK1Q96PY6 DUX4L9-201ENST00000449051 1259 ntBASIC28.1■■■□□ 2.09
NEK1Q96PY6 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.09■■■□□ 2.09
NEK1Q96PY6 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NEK1Q96PY6 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NEK1Q96PY6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NEK1Q96PY6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC28.09■■■□□ 2.09
NEK1Q96PY6 AC129492.7-201ENST00000622992 756 ntBASIC28.09■■■□□ 2.09
NEK1Q96PY6 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NEK1Q96PY6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NEK1Q96PY6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
NEK1Q96PY6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
NEK1Q96PY6 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NEK1Q96PY6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.08■■■□□ 2.09
NEK1Q96PY6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.08■■■□□ 2.09
NEK1Q96PY6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
NEK1Q96PY6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
NEK1Q96PY6 AC135731.1-201ENST00000569415 2548 ntBASIC28.07■■■□□ 2.08
NEK1Q96PY6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
NEK1Q96PY6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC28.07■■■□□ 2.08
NEK1Q96PY6 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
NEK1Q96PY6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
NEK1Q96PY6 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
NEK1Q96PY6 NTF6A-201ENST00000591175 560 ntBASIC28.06■■■□□ 2.08
NEK1Q96PY6 MIR6765-201ENST00000614092 87 ntBASIC28.06■■■□□ 2.08
NEK1Q96PY6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NEK1Q96PY6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NEK1Q96PY6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NEK1Q96PY6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
NEK1Q96PY6 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC28.06■■■□□ 2.08
NEK1Q96PY6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
NEK1Q96PY6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
NEK1Q96PY6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NEK1Q96PY6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
NEK1Q96PY6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NEK1Q96PY6 RPS2P7-201ENST00000447334 885 ntBASIC28.05■■■□□ 2.08
NEK1Q96PY6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
NEK1Q96PY6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.05■■■□□ 2.08
NEK1Q96PY6 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
NEK1Q96PY6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NEK1Q96PY6 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
NEK1Q96PY6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
NEK1Q96PY6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NEK1Q96PY6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
NEK1Q96PY6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NEK1Q96PY6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.03■■■□□ 2.08
NEK1Q96PY6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NEK1Q96PY6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
NEK1Q96PY6 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
NEK1Q96PY6 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
NEK1Q96PY6 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC28.02■■■□□ 2.08
NEK1Q96PY6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
NEK1Q96PY6 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
NEK1Q96PY6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.01■■■□□ 2.07
NEK1Q96PY6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
NEK1Q96PY6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
NEK1Q96PY6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
NEK1Q96PY6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC28■■■□□ 2.07
NEK1Q96PY6 AC087393.1-201ENST00000582896 145 ntBASIC28■■■□□ 2.07
NEK1Q96PY6 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28■■■□□ 2.07
NEK1Q96PY6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
NEK1Q96PY6 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms