Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC24.49■■□□□ 1.51
PJA1Q8NG27 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PJA1Q8NG27 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
PJA1Q8NG27 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PJA1Q8NG27 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PJA1Q8NG27 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.48■■□□□ 1.51
PJA1Q8NG27 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.48■■□□□ 1.51
PJA1Q8NG27 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PJA1Q8NG27 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.48■■□□□ 1.51
PJA1Q8NG27 MIR4281-201ENST00000580852 62 ntBASIC24.48■■□□□ 1.51
PJA1Q8NG27 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
PJA1Q8NG27 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PJA1Q8NG27 MIR6724-1-201ENST00000616420 92 ntBASIC24.47■■□□□ 1.51
PJA1Q8NG27 MIR6724-2-201ENST00000616483 92 ntBASIC24.47■■□□□ 1.51
PJA1Q8NG27 MIR6724-4-201ENST00000617390 92 ntBASIC24.47■■□□□ 1.51
PJA1Q8NG27 MIR6724-3-201ENST00000622482 92 ntBASIC24.47■■□□□ 1.51
PJA1Q8NG27 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PJA1Q8NG27 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PJA1Q8NG27 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PJA1Q8NG27 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC24.46■■□□□ 1.51
PJA1Q8NG27 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PJA1Q8NG27 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PJA1Q8NG27 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PJA1Q8NG27 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PJA1Q8NG27 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PJA1Q8NG27 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PJA1Q8NG27 MTDHP2-201ENST00000601468 714 ntBASIC24.44■■□□□ 1.5
PJA1Q8NG27 AL356740.2-201ENST00000601559 647 ntBASIC24.44■■□□□ 1.5
PJA1Q8NG27 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.44■■□□□ 1.5
PJA1Q8NG27 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PJA1Q8NG27 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.44■■□□□ 1.5
PJA1Q8NG27 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.44■■□□□ 1.5
PJA1Q8NG27 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PJA1Q8NG27 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PJA1Q8NG27 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PJA1Q8NG27 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PJA1Q8NG27 AC133561.4-201ENST00000566112 224 ntBASIC24.43■■□□□ 1.5
PJA1Q8NG27 MIR4466-201ENST00000606121 54 ntBASIC24.43■■□□□ 1.5
PJA1Q8NG27 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
PJA1Q8NG27 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.43■■□□□ 1.5
PJA1Q8NG27 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC24.42■■□□□ 1.5
PJA1Q8NG27 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC24.42■■□□□ 1.5
PJA1Q8NG27 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.42■■□□□ 1.5
PJA1Q8NG27 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC24.42■■□□□ 1.5
PJA1Q8NG27 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PJA1Q8NG27 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PJA1Q8NG27 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PJA1Q8NG27 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.41■■□□□ 1.5
PJA1Q8NG27 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
PJA1Q8NG27 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
PJA1Q8NG27 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
PJA1Q8NG27 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
PJA1Q8NG27 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.41■■□□□ 1.5
PJA1Q8NG27 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PJA1Q8NG27 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PJA1Q8NG27 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.4■■□□□ 1.5
PJA1Q8NG27 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PJA1Q8NG27 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC24.4■■□□□ 1.5
PJA1Q8NG27 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PJA1Q8NG27 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.5
PJA1Q8NG27 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
PJA1Q8NG27 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
PJA1Q8NG27 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PJA1Q8NG27 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.38■■□□□ 1.49
PJA1Q8NG27 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PJA1Q8NG27 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PJA1Q8NG27 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PJA1Q8NG27 AL121749.1-202ENST00000609313 2153 ntBASIC24.38■■□□□ 1.49
PJA1Q8NG27 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.38■■□□□ 1.49
PJA1Q8NG27 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
PJA1Q8NG27 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.38■■□□□ 1.49
PJA1Q8NG27 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.37■■□□□ 1.49
PJA1Q8NG27 DRD5P2-201ENST00000421395 2012 ntBASIC24.37■■□□□ 1.49
PJA1Q8NG27 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.37■■□□□ 1.49
PJA1Q8NG27 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PJA1Q8NG27 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.37■■□□□ 1.49
PJA1Q8NG27 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC24.37■■□□□ 1.49
PJA1Q8NG27 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC24.37■■□□□ 1.49
PJA1Q8NG27 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PJA1Q8NG27 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
PJA1Q8NG27 AL449106.1-201ENST00000608517 1980 ntBASIC24.36■■□□□ 1.49
PJA1Q8NG27 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.36■■□□□ 1.49
PJA1Q8NG27 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PJA1Q8NG27 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.36■■□□□ 1.49
PJA1Q8NG27 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.36■■□□□ 1.49
PJA1Q8NG27 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PJA1Q8NG27 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PJA1Q8NG27 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PJA1Q8NG27 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PJA1Q8NG27 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.35■■□□□ 1.49
PJA1Q8NG27 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.35■■□□□ 1.49
PJA1Q8NG27 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.35■■□□□ 1.49
PJA1Q8NG27 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
PJA1Q8NG27 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.34■■□□□ 1.49
PJA1Q8NG27 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.34■■□□□ 1.49
PJA1Q8NG27 AL512631.2-201ENST00000604634 923 ntBASIC24.34■■□□□ 1.49
PJA1Q8NG27 AC092666.2-201ENST00000613287 246 ntBASIC24.34■■□□□ 1.49
PJA1Q8NG27 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PJA1Q8NG27 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PJA1Q8NG27 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms