Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
LINC00346Q8IVM7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.95■□□□□ 0.94
LINC00346Q8IVM7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00346Q8IVM7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
LINC00346Q8IVM7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00346Q8IVM7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.94■□□□□ 0.94
LINC00346Q8IVM7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
LINC00346Q8IVM7 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LINC00346Q8IVM7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LINC00346Q8IVM7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LINC00346Q8IVM7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00346Q8IVM7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.92■□□□□ 0.94
LINC00346Q8IVM7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LINC00346Q8IVM7 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LINC00346Q8IVM7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00346Q8IVM7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00346Q8IVM7 AC026202.3-201ENST00000600805 1127 ntBASIC20.91■□□□□ 0.94
LINC00346Q8IVM7 RAP2CP1-202ENST00000605179 643 ntBASIC20.91■□□□□ 0.94
LINC00346Q8IVM7 AL139125.2-201ENST00000623134 1869 ntBASIC20.91■□□□□ 0.94
LINC00346Q8IVM7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00346Q8IVM7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LINC00346Q8IVM7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00346Q8IVM7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LINC00346Q8IVM7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LINC00346Q8IVM7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LINC00346Q8IVM7 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.9■□□□□ 0.94
LINC00346Q8IVM7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LINC00346Q8IVM7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00346Q8IVM7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LINC00346Q8IVM7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00346Q8IVM7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00346Q8IVM7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
LINC00346Q8IVM7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LINC00346Q8IVM7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LINC00346Q8IVM7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00346Q8IVM7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00346Q8IVM7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00346Q8IVM7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LINC00346Q8IVM7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00346Q8IVM7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00346Q8IVM7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.87■□□□□ 0.93
LINC00346Q8IVM7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.87■□□□□ 0.93
LINC00346Q8IVM7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00346Q8IVM7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00346Q8IVM7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LINC00346Q8IVM7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.86■□□□□ 0.93
LINC00346Q8IVM7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 AC009831.1-201ENST00000580420 1582 ntBASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 RNF126P1-201ENST00000567452 1320 ntBASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LINC00346Q8IVM7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.84■□□□□ 0.93
LINC00346Q8IVM7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00346Q8IVM7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00346Q8IVM7 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.83■□□□□ 0.93
LINC00346Q8IVM7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LINC00346Q8IVM7 AC133552.2-201ENST00000619106 1032 ntBASIC20.83■□□□□ 0.93
LINC00346Q8IVM7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LINC00346Q8IVM7 AP003733.4-201ENST00000623785 1697 ntBASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms