Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5BP61020 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5BP61020 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.68■□□□□ 0.58
RAB5BP61020 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RAB5BP61020 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
RAB5BP61020 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB5BP61020 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RAB5BP61020 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RAB5BP61020 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.67■□□□□ 0.58
RAB5BP61020 EP400NL-214ENST00000641289 2402 ntBASIC18.66■□□□□ 0.58
RAB5BP61020 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RAB5BP61020 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB5BP61020 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB5BP61020 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB5BP61020 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RAB5BP61020 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.66■□□□□ 0.58
RAB5BP61020 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.66■□□□□ 0.58
RAB5BP61020 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RAB5BP61020 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5BP61020 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
RAB5BP61020 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5BP61020 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB5BP61020 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RAB5BP61020 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB5BP61020 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.64■□□□□ 0.58
RAB5BP61020 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB5BP61020 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5BP61020 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
RAB5BP61020 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RAB5BP61020 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5BP61020 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5BP61020 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RAB5BP61020 AC100797.4-201ENST00000631653 1827 ntBASIC18.63■□□□□ 0.57
RAB5BP61020 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5BP61020 AC137767.1-201ENST00000602918 1920 ntBASIC18.63■□□□□ 0.57
RAB5BP61020 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB5BP61020 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5BP61020 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.63■□□□□ 0.57
RAB5BP61020 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RAB5BP61020 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB5BP61020 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RAB5BP61020 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB5BP61020 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5BP61020 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5BP61020 WHAMMP2-203ENST00000563942 1603 ntBASIC18.62■□□□□ 0.57
RAB5BP61020 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5BP61020 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB5BP61020 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5BP61020 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5BP61020 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB5BP61020 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB5BP61020 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB5BP61020 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5BP61020 AC096887.2-201ENST00000623443 1957 ntBASIC18.6■□□□□ 0.57
RAB5BP61020 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5BP61020 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5BP61020 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB5BP61020 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB5BP61020 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RAB5BP61020 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RAB5BP61020 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB5BP61020 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB5BP61020 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RAB5BP61020 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB5BP61020 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
RAB5BP61020 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB5BP61020 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
RAB5BP61020 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB5BP61020 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB5BP61020 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
RAB5BP61020 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB5BP61020 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB5BP61020 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB5BP61020 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.56■□□□□ 0.56
RAB5BP61020 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms