Protein–RNA interactions for Protein: P0CX58

TY1A-PR1, Transposon Ty1-PR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-PR1P0CX58 TOM6YOR045W 186 nt7.77□□□□□ -1.17
TY1A-PR1P0CX58 ETT1YOR051C 1239 nt7.77□□□□□ -1.17
TY1A-PR1P0CX58 GND2YGR256W 1479 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 YHL012WYHL012W 1482 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 SMP1YBR182C 1359 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 SCM3YDL139C 672 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 SED1YDR077W 1017 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 EMC4YGL231C 573 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 GIC1YHR061C 945 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 SML1YML058W 315 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 AIF1YNR074C 1137 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 YOR292CYOR292C 930 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 BRR1YPR057W 1026 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 TRS20YBR254C 528 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 KAR4YCL055W 1008 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 ALR1YOL130W 2580 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 UBP13YBL067C 2244 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 STB3YDR169C 1542 nt7.76□□□□□ -1.17
TY1A-PR1P0CX58 MSS116YDR194C 1995 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 SES1YDR023W 1389 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 DAK2YFL053W 1776 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 PTC1YDL006W 846 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 VMA16YHR026W 642 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 MNN11YJL183W 1269 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 SPC34YKR037C 888 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 PML1YLR016C 615 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 PER33YLR064W 822 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 DUS4YLR405W 1104 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 YML089CYML089C 369 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 YOL118CYOL118C 309 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 MTG2YHR168W 1557 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 FET5YFL041W 1869 nt7.75□□□□□ -1.17
TY1A-PR1P0CX58 HEM14YER014W 1620 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 IWR1YDL115C 1062 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 HEM13YDR044W 987 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 TLG1YDR468C 675 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 CNN1YFR046C 1086 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 RFA3YJL173C 369 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 TOA2YKL058W 369 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 YKL162CYKL162C 1209 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 YAR053WYAR053W 297 nt7.74□□□□□ -1.17
TY1A-PR1P0CX58 Q0032Q0032 291 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 DET1YDR051C 1005 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 MRF1YGL143C 1242 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 YHR173CYHR173C 339 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 CAB2YIL083C 1098 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 POM33YLL023C 840 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 SAM1YLR180W 1149 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 REC102YLR329W 795 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 YMR085WYMR085W 1299 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 SSO2YMR183C 888 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 YOR111WYOR111W 699 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 TIF6YPR016C 738 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 YPR016W-AYPR016W-A 261 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 ATG14YBR128C 1035 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 UMP1YBR173C 447 nt7.73□□□□□ -1.17
TY1A-PR1P0CX58 VPS62YGR141W 1404 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 YDL086WYDL086W 822 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 RSM27YGR215W 333 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 YJL215CYJL215C 360 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 YAR030CYAR030C 342 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 LSR1LSR1 1175 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 MED4YOR174W 855 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 HUT1YPL244C 1020 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 CTI6YPL181W 1521 nt7.72□□□□□ -1.17
TY1A-PR1P0CX58 IVY1YDR229W 1362 nt7.71□□□□□ -1.17
TY1A-PR1P0CX58 SPO23YBR250W 1572 nt7.71□□□□□ -1.17
TY1A-PR1P0CX58 TGL1YKL140W 1647 nt7.71□□□□□ -1.17
TY1A-PR1P0CX58 ARO3YDR035W 1113 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 YDR157WYDR157W 402 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 YER084W-AYER084W-A 513 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 SHO1YER118C 1104 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 VMA7YGR020C 357 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 TRT2tT(CGU)K 72 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 AIM20YIL158W 615 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 NFU1YKL040C 771 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 YLR363W-AYLR363W-A 258 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 SUR7YML052W 909 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 ALG14YBR070C 714 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 DTR1YBR180W 1719 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 SUP45YBR143C 1314 nt7.71□□□□□ -1.18
TY1A-PR1P0CX58 NRT1YOR071C 1797 nt7.7□□□□□ -1.18
TY1A-PR1P0CX58 YDR282CYDR282C 1245 nt7.7□□□□□ -1.18
TY1A-PR1P0CX58 YIM1YMR152W 1098 nt7.7□□□□□ -1.18
TY1A-PR1P0CX58 YOL035CYOL035C 303 nt7.7□□□□□ -1.18
TY1A-PR1P0CX58 FIT1YDR534C 1587 nt7.7□□□□□ -1.18
TY1A-PR1P0CX58 AI4Q0065 1671 nt7.7□□□□□ -1.18
TY1A-PR1P0CX58 YRF1-2YER190W 5046 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 DUR3YHL016C 2208 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)BtD(GUC)B 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)DtD(GUC)D 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)G1tD(GUC)G1 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)G2tD(GUC)G2 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)I1tD(GUC)I1 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)I2tD(GUC)I2 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)J1tD(GUC)J1 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)J2tD(GUC)J2 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)J3tD(GUC)J3 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)J4tD(GUC)J4 72 nt7.69□□□□□ -1.18
TY1A-PR1P0CX58 tD(GUC)KtD(GUC)K 72 nt7.69□□□□□ -1.18
Retrieved 100 of 7,029 protein–RNA pairs in 70.5 ms