Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 AC097639.1-201ENST00000565519 1891 ntBASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TRAV38-1A0A0B4J264 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TRAV38-1A0A0B4J264 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV38-1A0A0B4J264 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV38-1A0A0B4J264 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV38-1A0A0B4J264 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRAV38-1A0A0B4J264 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.94■□□□□ 0.78
TRAV38-1A0A0B4J264 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.94■□□□□ 0.78
TRAV38-1A0A0B4J264 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV38-1A0A0B4J264 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRAV38-1A0A0B4J264 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV38-1A0A0B4J264 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV38-1A0A0B4J264 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV38-1A0A0B4J264 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV38-1A0A0B4J264 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 AC019171.1-201ENST00000601251 1056 ntBASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
TRAV38-1A0A0B4J264 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV38-1A0A0B4J264 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV38-1A0A0B4J264 LONRF2P2-201ENST00000439212 571 ntBASIC19.9■□□□□ 0.78
TRAV38-1A0A0B4J264 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV38-1A0A0B4J264 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV38-1A0A0B4J264 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV38-1A0A0B4J264 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRAV38-1A0A0B4J264 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 AC010980.1-201ENST00000587192 1142 ntBASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRAV38-1A0A0B4J264 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
TRAV38-1A0A0B4J264 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV38-1A0A0B4J264 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV38-1A0A0B4J264 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.87■□□□□ 0.77
TRAV38-1A0A0B4J264 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.87■□□□□ 0.77
TRAV38-1A0A0B4J264 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV38-1A0A0B4J264 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms