Protein–RNA interactions for Protein: A0A075B6W5

TRAV23DV6, T-cell receptor alpha variable 23/delta variable 6 (Fragment), humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV23DV6A0A075B6W5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV23DV6A0A075B6W5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAV23DV6A0A075B6W5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 AC079834.2-201ENST00000609776 1949 ntBASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRAV23DV6A0A075B6W5 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 AP006261.1-201ENST00000584783 668 ntBASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAV23DV6A0A075B6W5 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV23DV6A0A075B6W5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TRAV23DV6A0A075B6W5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV23DV6A0A075B6W5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV23DV6A0A075B6W5 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV23DV6A0A075B6W5 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV23DV6A0A075B6W5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV23DV6A0A075B6W5 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV23DV6A0A075B6W5 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV23DV6A0A075B6W5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV23DV6A0A075B6W5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV23DV6A0A075B6W5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV23DV6A0A075B6W5 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV23DV6A0A075B6W5 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 AC044849.2-201ENST00000606596 710 ntBASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV23DV6A0A075B6W5 AC097639.1-201ENST00000565519 1891 ntBASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV23DV6A0A075B6W5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms