Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCA3PQ9Y6N3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CLCA3PQ9Y6N3 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CLCA3PQ9Y6N3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.63■□□□□ 0.09
CLCA3PQ9Y6N3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLCA3PQ9Y6N3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLCA3PQ9Y6N3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLCA3PQ9Y6N3 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 RPSAP43-201ENST00000402237 625 ntBASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 MIR1233-2-201ENST00000408138 82 ntBASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 MIR1233-1-201ENST00000408722 82 ntBASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 HTR5BP-201ENST00000430851 1154 ntBASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 AC112482.1-201ENST00000492080 688 ntBASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLCA3PQ9Y6N3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 ACTG1P14-201ENST00000446382 1122 ntBASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 MIR3909-201ENST00000579518 119 ntBASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 AL009183.1-201ENST00000603760 355 ntBASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 AL161645.1-201ENST00000622716 1255 ntBASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 AL139011.1-202ENST00000642063 584 ntBASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLCA3PQ9Y6N3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms