Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 ZBTB45P2-201ENST00000452245 1531 ntBASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 AMT-232ENST00000636199 1546 ntTSL 5 BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC24.04■■□□□ 1.44
SHANK2Q9UPX8 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 MIR5189-201ENST00000577370 114 ntBASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 NF2-208ENST00000403435 2568 ntTSL 5 BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SHANK2Q9UPX8 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 CDC14C-201ENST00000428251 1719 ntBASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 AC010319.3-201ENST00000597028 470 ntBASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 ME2P1-201ENST00000426028 1970 ntBASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SHANK2Q9UPX8 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 RPF1-202ENST00000370656 724 ntTSL 2 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 NME6-203ENST00000415644 849 ntTSL 2 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 AL512343.1-201ENST00000605837 169 ntBASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC24.01■■□□□ 1.43
SHANK2Q9UPX8 MPV17-208ENST00000405076 603 ntTSL 5 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 TOMM22P5-201ENST00000416399 439 ntBASIC24■■□□□ 1.43
SHANK2Q9UPX8 HLA-DPB2-205ENST00000435074 1188 ntBASIC24■■□□□ 1.43
SHANK2Q9UPX8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHANK2Q9UPX8 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
SHANK2Q9UPX8 HNRNPA1P48-201ENST00000562726 1377 ntBASIC24■■□□□ 1.43
SHANK2Q9UPX8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 AC092933.1-201ENST00000393644 945 ntBASIC24■■□□□ 1.43
SHANK2Q9UPX8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
SHANK2Q9UPX8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SHANK2Q9UPX8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC24■■□□□ 1.43
SHANK2Q9UPX8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC24■■□□□ 1.43
SHANK2Q9UPX8 MIR6787-201ENST00000616675 61 ntBASIC24■■□□□ 1.43
SHANK2Q9UPX8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC23.99■■□□□ 1.43
SHANK2Q9UPX8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
SHANK2Q9UPX8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SHANK2Q9UPX8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms