Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 AL390754.1-201ENST00000619088 582 ntBASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PDZRN3Q9UPQ7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 AC097493.3-201ENST00000509725 367 ntBASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PDZRN3Q9UPQ7 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PDZRN3Q9UPQ7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 AC026691.1-201ENST00000602502 2017 ntBASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 PC-204ENST00000524491 1714 ntTSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PDZRN3Q9UPQ7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms