Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.53■□□□□ 0.72
CLIP2Q9UDT6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 KRT8P23-201ENST00000560090 1207 ntBASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 AL138918.1-201ENST00000568306 659 ntBASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 AC027307.2-201ENST00000591252 911 ntBASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CLIP2Q9UDT6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLIP2Q9UDT6 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLIP2Q9UDT6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CLIP2Q9UDT6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.52■□□□□ 0.71
CLIP2Q9UDT6 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
CLIP2Q9UDT6 PCDHA1-201ENST00000378133 2726 ntBASIC19.52■□□□□ 0.71
CLIP2Q9UDT6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.52■□□□□ 0.71
CLIP2Q9UDT6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 AC079328.2-201ENST00000561241 3354 ntBASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 GPS2P2-201ENST00000430745 888 ntBASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 WDR53-204ENST00000433160 887 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 RBPMS2P1-201ENST00000437762 623 ntBASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 AC008267.7-201ENST00000624570 1194 ntBASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 SNX33P1-201ENST00000592116 1762 ntBASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.51■□□□□ 0.71
CLIP2Q9UDT6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 AL391256.1-201ENST00000443260 1855 ntBASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 AL645728.1-201ENST00000366221 2101 ntBASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.5■□□□□ 0.71
CLIP2Q9UDT6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms