Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 MIR346-201ENST00000362234 95 ntBASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 BX842568.4-201ENST00000421222 227 ntBASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 RN7SL589P-201ENST00000481268 310 ntBASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 AC105233.2-201ENST00000523697 349 ntBASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 AF228730.5-201ENST00000530288 346 ntBASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 MIR4469-201ENST00000583919 79 ntBASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
BLOC1S4Q9NUP1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 UPF3AP3-201ENST00000420996 769 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 SPDYE11-202ENST00000450699 704 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 CEND1P1-201ENST00000451006 455 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 TIMM8BP1-201ENST00000452384 211 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 SPDYE9P-201ENST00000570642 692 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 SPDYE10P-202ENST00000612005 668 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 SPDYE8P-202ENST00000612377 668 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 AC105339.1-204ENST00000636249 355 ntBASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
BLOC1S4Q9NUP1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AC069335.1-201ENST00000489972 472 ntBASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AP000842.3-202ENST00000569238 1080 ntBASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
BLOC1S4Q9NUP1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms