Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC105233.2-201ENST00000523697 349 ntBASIC17.53■□□□□ 0.4
CISHQ9NSE2 AF228730.5-201ENST00000530288 346 ntBASIC17.53■□□□□ 0.4
CISHQ9NSE2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CISHQ9NSE2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CISHQ9NSE2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CISHQ9NSE2 AC006449.6-201ENST00000612330 2296 ntBASIC17.52■□□□□ 0.4
CISHQ9NSE2 AL592424.1-201ENST00000563624 1536 ntBASIC17.52■□□□□ 0.4
CISHQ9NSE2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 CYP2T1P-202ENST00000641596 2535 ntBASIC17.52■□□□□ 0.4
CISHQ9NSE2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 AL592309.1-201ENST00000443127 649 ntBASIC17.52■□□□□ 0.4
CISHQ9NSE2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CISHQ9NSE2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.52■□□□□ 0.4
CISHQ9NSE2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
CISHQ9NSE2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.52■□□□□ 0.39
CISHQ9NSE2 MTHFR-217ENST00000641820 1569 ntBASIC17.52■□□□□ 0.39
CISHQ9NSE2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CISHQ9NSE2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CISHQ9NSE2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CISHQ9NSE2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CISHQ9NSE2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.52■□□□□ 0.39
CISHQ9NSE2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CISHQ9NSE2 FOXO1B-201ENST00000504678 1527 ntBASIC17.52■□□□□ 0.39
CISHQ9NSE2 AL589702.1-201ENST00000641229 1509 ntBASIC17.52■□□□□ 0.39
CISHQ9NSE2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CISHQ9NSE2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 MIR1233-2-201ENST00000408138 82 ntBASIC17.51■□□□□ 0.39
CISHQ9NSE2 MIR1233-1-201ENST00000408722 82 ntBASIC17.51■□□□□ 0.39
CISHQ9NSE2 AC004461.1-201ENST00000412461 403 ntBASIC17.51■□□□□ 0.39
CISHQ9NSE2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 AC069335.1-201ENST00000489972 472 ntBASIC17.51■□□□□ 0.39
CISHQ9NSE2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 IGHV3-62-201ENST00000520057 340 ntBASIC17.51■□□□□ 0.39
CISHQ9NSE2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 AP000842.3-202ENST00000569238 1080 ntBASIC17.51■□□□□ 0.39
CISHQ9NSE2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 AC134684.3-201ENST00000641758 218 ntBASIC17.51■□□□□ 0.39
CISHQ9NSE2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CISHQ9NSE2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CISHQ9NSE2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms