Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.39■□□□□ 0.54
KCNMB3Q9NPA1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 RNA5SP410-201ENST00000516285 106 ntBASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 AC069262.1-201ENST00000539058 672 ntBASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 AC024267.1-201ENST00000582320 895 ntBASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 AC015911.4-201ENST00000588022 1070 ntBASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 AC018529.1-201ENST00000613063 361 ntBASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNMB3Q9NPA1 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 PCDH8P1-201ENST00000428983 2773 ntBASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 AC008677.1-201ENST00000519230 1561 ntBASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNMB3Q9NPA1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 CYP2T1P-202ENST00000641596 2535 ntBASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 Z92544.3-201ENST00000624747 417 ntBASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNMB3Q9NPA1 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms