Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 AC007967.2-201ENST00000432613 625 ntBASIC17.03■□□□□ 0.32
PCDH9Q9HC56 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 AC064836.3-201ENST00000607928 673 ntBASIC17.03■□□□□ 0.32
PCDH9Q9HC56 ACTL9-202ENST00000612068 1252 ntBASIC17.03■□□□□ 0.32
PCDH9Q9HC56 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH9Q9HC56 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 AC010491.1-201ENST00000563101 2797 ntBASIC17.02■□□□□ 0.32
PCDH9Q9HC56 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
PCDH9Q9HC56 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.02■□□□□ 0.32
PCDH9Q9HC56 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH9Q9HC56 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH9Q9HC56 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.02■□□□□ 0.31
PCDH9Q9HC56 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
PCDH9Q9HC56 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.02■□□□□ 0.31
PCDH9Q9HC56 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PCDH9Q9HC56 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.01■□□□□ 0.31
PCDH9Q9HC56 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 AC027601.4-201ENST00000611259 610 ntBASIC17.01■□□□□ 0.31
PCDH9Q9HC56 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.01■□□□□ 0.31
PCDH9Q9HC56 AC010507.1-201ENST00000633895 436 ntBASIC17.01■□□□□ 0.31
PCDH9Q9HC56 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDH9Q9HC56 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms