Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 ABCD1P5-201ENST00000445663 754 ntBASIC20.29■□□□□ 0.84
UPF2Q9HAU5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 MPDU1-223ENST00000582151 728 ntBASIC20.29■□□□□ 0.84
UPF2Q9HAU5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 AC016734.2-201ENST00000624325 1377 ntBASIC20.29■□□□□ 0.84
UPF2Q9HAU5 AC023824.1-201ENST00000562945 2975 ntBASIC20.29■□□□□ 0.84
UPF2Q9HAU5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.29■□□□□ 0.84
UPF2Q9HAU5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 PRAL-201ENST00000624952 3286 ntBASIC20.28■□□□□ 0.84
UPF2Q9HAU5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 POM121L3P-201ENST00000419331 1163 ntBASIC20.28■□□□□ 0.84
UPF2Q9HAU5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.28■□□□□ 0.84
UPF2Q9HAU5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UPF2Q9HAU5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 LINC02447-202ENST00000501888 2146 ntBASIC20.27■□□□□ 0.84
UPF2Q9HAU5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 GPAA1P2-202ENST00000606848 1787 ntBASIC20.27■□□□□ 0.84
UPF2Q9HAU5 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 DRAXINP1-201ENST00000437611 948 ntBASIC20.27■□□□□ 0.84
UPF2Q9HAU5 TOB2P1-201ENST00000469761 992 ntBASIC20.27■□□□□ 0.84
UPF2Q9HAU5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
UPF2Q9HAU5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 NCF1C-201ENST00000438382 1427 ntBASIC20.27■□□□□ 0.83
UPF2Q9HAU5 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.27■□□□□ 0.83
UPF2Q9HAU5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
UPF2Q9HAU5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms