Protein–RNA interactions for Protein: Q9H239

MMP28, Matrix metalloproteinase-28, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28Q9H239 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.62□□□□□ -0.07
MMP28Q9H239 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP28Q9H239 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP28Q9H239 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
MMP28Q9H239 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.62□□□□□ -0.07
MMP28Q9H239 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP28Q9H239 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP28Q9H239 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
MMP28Q9H239 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP28Q9H239 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
MMP28Q9H239 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.61□□□□□ -0.07
MMP28Q9H239 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.61□□□□□ -0.07
MMP28Q9H239 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.61□□□□□ -0.07
MMP28Q9H239 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 KRT8P26-201ENST00000534154 1276 ntBASIC14.61□□□□□ -0.07
MMP28Q9H239 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.61□□□□□ -0.07
MMP28Q9H239 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
MMP28Q9H239 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
MMP28Q9H239 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
MMP28Q9H239 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
MMP28Q9H239 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.6□□□□□ -0.07
MMP28Q9H239 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.6□□□□□ -0.07
MMP28Q9H239 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
MMP28Q9H239 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
MMP28Q9H239 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 AL450487.1-201ENST00000426799 995 ntBASIC14.6□□□□□ -0.07
MMP28Q9H239 BX276092.5-203ENST00000456199 560 ntBASIC14.6□□□□□ -0.07
MMP28Q9H239 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.6□□□□□ -0.07
MMP28Q9H239 AC112698.1-201ENST00000510299 916 ntBASIC14.6□□□□□ -0.07
MMP28Q9H239 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.6□□□□□ -0.07
MMP28Q9H239 AC090616.6-201ENST00000582640 721 ntBASIC14.6□□□□□ -0.07
MMP28Q9H239 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.6□□□□□ -0.07
MMP28Q9H239 CLEC4GP1-201ENST00000596555 870 ntBASIC14.6□□□□□ -0.07
MMP28Q9H239 AL121672.3-201ENST00000608644 468 ntBASIC14.6□□□□□ -0.07
MMP28Q9H239 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.6□□□□□ -0.07
MMP28Q9H239 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.6□□□□□ -0.07
MMP28Q9H239 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
MMP28Q9H239 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
MMP28Q9H239 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms