Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 KRT18P27-201ENST00000427733 1299 ntBASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 RPS15P9-201ENST00000494093 319 ntBASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 AC020765.3-201ENST00000613051 740 ntBASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 SLC22A20-204ENST00000530038 1673 ntBASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
POLR2J3Q9H1A7 AC067930.6-201ENST00000623257 4947 ntBASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 PCGF3-213ENST00000620529 1899 ntBASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 AC010491.1-201ENST00000563101 2797 ntBASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 AC103702.1-201ENST00000548801 2630 ntBASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 PMS2P1-201ENST00000431037 1228 ntBASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 AC021087.4-201ENST00000563761 564 ntBASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
POLR2J3Q9H1A7 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
POLR2J3Q9H1A7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
POLR2J3Q9H1A7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms