Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-2Q9C056 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.4□□□□□ -0.26
NKX6-2Q9C056 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NKX6-2Q9C056 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
NKX6-2Q9C056 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX6-2Q9C056 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
NKX6-2Q9C056 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX6-2Q9C056 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
NKX6-2Q9C056 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.39□□□□□ -0.27
NKX6-2Q9C056 SEC1P-202ENST00000473944 940 ntBASIC13.39□□□□□ -0.27
NKX6-2Q9C056 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 MIR3917-201ENST00000580971 93 ntBASIC13.39□□□□□ -0.27
NKX6-2Q9C056 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 AP001412.1-201ENST00000608405 714 ntBASIC13.39□□□□□ -0.27
NKX6-2Q9C056 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 AC006504.5-208ENST00000588784 2401 ntBASIC13.39□□□□□ -0.27
NKX6-2Q9C056 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
NKX6-2Q9C056 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 AC116562.4-202ENST00000641738 218 ntBASIC13.38□□□□□ -0.27
NKX6-2Q9C056 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 BEND3P1-201ENST00000421591 1944 ntBASIC13.38□□□□□ -0.27
NKX6-2Q9C056 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 TMBIM7P-203ENST00000641617 1718 ntBASIC13.38□□□□□ -0.27
NKX6-2Q9C056 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 AC092338.2-201ENST00000568827 1415 ntBASIC13.38□□□□□ -0.27
NKX6-2Q9C056 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NKX6-2Q9C056 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.37□□□□□ -0.27
NKX6-2Q9C056 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms