Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 FLJ38576-201ENST00000623820 2459 ntBASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
CRNKL1Q9BZJ0 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 AJ011932.1-201ENST00000621707 465 ntBASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CRNKL1Q9BZJ0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 HLA-V-204ENST00000476601 1289 ntBASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 MIR3197-201ENST00000582241 73 ntBASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 AL138828.2-201ENST00000615812 383 ntBASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CRNKL1Q9BZJ0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AGGF1P2-201ENST00000426656 2106 ntBASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AC241585.1-201ENST00000433527 519 ntBASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AL512638.1-201ENST00000457493 794 ntBASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AL365330.1-201ENST00000607459 531 ntBASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AL589739.1-201ENST00000607720 493 ntBASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 CETN4P-206ENST00000642099 2168 ntBASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 AC092171.3-201ENST00000610122 2651 ntBASIC19.47■□□□□ 0.71
CRNKL1Q9BZJ0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRNKL1Q9BZJ0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CRNKL1Q9BZJ0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRNKL1Q9BZJ0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRNKL1Q9BZJ0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CRNKL1Q9BZJ0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms