Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 AL603756.1-201ENST00000606511 2163 ntBASIC17.1■□□□□ 0.33
LRRC3Q9BY71 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 PKD1P1-201ENST00000458669 6805 ntBASIC17.1■□□□□ 0.33
LRRC3Q9BY71 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 CECR7-204ENST00000609932 568 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRRC3Q9BY71 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRRC3Q9BY71 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 AC006538.1-201ENST00000567905 1585 ntBASIC17.08■□□□□ 0.32
LRRC3Q9BY71 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 AL512361.1-201ENST00000554200 418 ntBASIC17.08■□□□□ 0.32
LRRC3Q9BY71 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRRC3Q9BY71 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms