Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 AP000867.3-201ENST00000524675 377 ntBASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 RNF126P1-202ENST00000569893 925 ntBASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 AC012313.10-201ENST00000623509 926 ntBASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 AC023157.3-201ENST00000619086 2088 ntBASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SBF1P1-201ENST00000444527 5631 ntBASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 BX276092.7-203ENST00000637198 1536 ntBASIC12.83□□□□□ -0.36
NDUFAF3Q9BU61 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 DRAXINP1-201ENST00000437611 948 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 AP002383.4-201ENST00000442518 975 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 NUS1P1-201ENST00000446295 882 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 AC104819.1-201ENST00000504587 486 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 MIR3180-1-201ENST00000580374 94 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 MIR3180-3-201ENST00000584616 94 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 TEN1-204ENST00000588202 862 ntTSL 3 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 Z69720.1-201ENST00000601483 472 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 AL121894.2-201ENST00000602977 491 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 AL121772.3-201ENST00000610840 674 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 LINC00304-203ENST00000565008 1864 ntBASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
NDUFAF3Q9BU61 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms